DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht11 and cht-1

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_508588.1 Gene:cht-1 / 180628 WormBaseID:WBGene00000503 Length:617 Species:Caenorhabditis elegans


Alignment Length:387 Identity:110/387 - (28%)
Similarity:174/387 - (44%) Gaps:57/387 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 CYYASDGTHNLSLLD-VPGD----LCTHINIG--------------PATLDNATIVLPDTLRQVL 116
            ||:.:...:...... ||.|    |||||...              ||.|.|      |...:.:
 Worm    57 CYFTNWAQYRQGRAKFVPEDYTPGLCTHILFAFGWMNADYTVRAYDPADLPN------DWAGEGM 115

  Fly   117 QNDTRSFRAAHPQVHLLLWIGGADSGRS-FALMVANHAMRKLFLRSLREILRTYPSLDGIDLDWE 180
            .......:....|:..||..||...|.: |..|.|:.|.||:|:.|....:||: ..||||:|||
 Worm   116 YRRVNKLKVTDTQLKTLLSFGGWSFGTALFQGMAASSASRKVFIDSAITFVRTW-GFDGIDIDWE 179

  Fly   181 FPSAYDRERMHLSQLLYEIRTEWRREKRTND----ILSLAVAAPEGIAFYAYDIREINLYADYVN 241
            :||. ..:..:...|:.|::.....|..:..    :::.||||........|||..:....|::.
 Worm   180 YPSG-ATDMANYVALVKELKAACESEAGSTGKDRLLVTAAVAAGPATIDAGYDIPNLAPNFDFIL 243

  Fly   242 LMSYDFHFYREDTPFTGLNAPLYARSQERSLMATFNINYTVQWWLKSGLEPQRLVVGLPTYGHSF 306
            |||||  |:.......|.|:||||.::..:....:|::.:.::|.:.|:..::::||:||||..:
 Worm   244 LMSYD--FFGAWASLVGFNSPLYATTELPAEWNGWNVDSSARYWNQKGMPKEKIIVGMPTYGRGW 306

  Fly   307 TL-----VNPLNHRIGAPASGYGKCGQLGFTTLTETCECV----TKFFKPNLSYDAESCSPYLSA 362
            ||     :||  ...|:||.......:.|.....|.||.:    |::      :|::|..|||..
 Worm   307 TLNNASAINP--GTSGSPAKITQYVQEAGVGAYFEFCEMLANGATRY------WDSQSQVPYLVQ 363

  Fly   363 LQEWISYENQTSIACKANYVKSLNLGGVMVFSLNTDDLKNSCSIMPNLKYSEKPVFPLTQAI 424
            ..:|.||:::.|.|.|..|||....||..|::|:.||....||      .|...::||...|
 Worm   364 GNQWWSYDDEESFANKMAYVKREGYGGAFVWTLDFDDFNAGCS------NSNGQLYPLISVI 419

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 102/359 (28%)
GH18_chitinase-like 69..428 CDD:299167 110/387 (28%)
cht-1NP_508588.1 GH18_chitolectin_chitotriosidase 55..423 CDD:119351 110/387 (28%)
Glyco_18 57..399 CDD:214753 102/359 (28%)
CBM_14 481..532 CDD:279884
CBM_14 567..615 CDD:279884
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D264489at33208
OrthoFinder 1 1.000 - - FOG0000107
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11177
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

Return to query results.
Submit another query.