DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and cht-3

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_501082.2 Gene:cht-3 / 177464 WormBaseID:WBGene00016084 Length:1067 Species:Caenorhabditis elegans


Alignment Length:429 Identity:83/429 - (19%)
Similarity:156/429 - (36%) Gaps:90/429 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 FIGLGL-----------LGIQTGEVHKVGQRLV--------------CYYASDGTHNLSLLD-VP 87
            |.|:|:           .|......|::...|:              ||...:.......:| :.
 Worm   329 FAGIGISHALFDDPRGDCGTDPLPAHRLVMELIRNTIPANPAKCTRLCYLDPEEVEETFPIDNLK 393

  Fly    88 GDLCTHINIGPATLDNATIVLPDTLRQVLQNDTRSFRAAHPQV--HLLLWIGGADSGRSFALMVA 150
            .|.|:||.:....||.:..::.:...:.|......:|:...:|  .|:|.:|...:...:..::.
 Worm   394 SDYCSHIVVPYFALDLSDKMIEEDKAEDLVKKIDDWRSKIVEVAPRLILSVGSKQASTIWQFLLG 458

  Fly   151 NHAMRKLFLRSLREILRTYPSLDGIDLDW-EFPSAYDRERMHLSQLLYEIRTEWRREKRTNDILS 214
            |...||.....|.:.:.: .:.||:::.| ..|...|.::.:|...:.:|..     ..|..::.
 Worm   459 NDFHRKELAEGLVKAINS-TNADGLEISWTSQPMVSDFDKKNLKSFINDIVA-----ADTAKMVE 517

  Fly   215 LAVAAPEGIAFY-AYDIREINLYADYVNLMSYDFHFYREDTPFTGLNAPLYARSQERSLMATFNI 278
            :.||..:..|:. .||...:|..|..:.|.|:..|  .:..||||..:||.|.|.        ..
 Worm   518 IVVATSQQSAYSDFYDYEHLNKTASLIVLHSHRLH--SDSLPFTGHPSPLRATSS--------MT 572

  Fly   279 NYTVQW------WLKSGLEPQRLVVGLPTYGHSFTLVNPLNHRIGAPASGYGKCGQLGFTTLTET 337
            |..:.|      |::..:.|.:||:.|.....|...:..:......|      .||..|.::..:
 Worm   573 NQKMSWESLLSHWVEKRVLPSKLVLSLSASTLSMQSLADVRSSAATP------FGQSAFVSMLRS 631

  Fly   338 CECVTKFFKPNLSYDAESCS-----------------PYLSALQEWISYENQTSIACKANYVKSL 385
                   .|.::....|.|.                 |||....:.::|||..|...||.:....
 Worm   632 -------KKGDIHSQQEICESLKSGTGVTHWVDGAEVPYLRRYDQMVAYENTRSAHIKAVWASME 689

  Fly   386 NLGGVMVFSLNTDDLKNSCSIMPNLKYSEKPVFPLTQAI 424
            .:||:.:.:::.||        |:.....:..||:..|:
 Worm   690 GVGGLALHNMHQDD--------PSAVCDNRTAFPILNAL 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 72/371 (19%)
GH18_chitinase-like 69..428 CDD:299167 78/398 (20%)
cht-3NP_501082.2 Glyco_18 51..334 CDD:214753 2/4 (50%)
GH18_chitinase-like 51..>103 CDD:299167
Glyco_18 375..702 CDD:214753 71/355 (20%)
GH18_chitinase-like 387..723 CDD:299167 75/371 (20%)
Glyco_hydro_18 761..1043 CDD:279094
GH18_chitinase-like <1018..1062 CDD:299167
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S4712
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.760

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