DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and cht-3

DIOPT Version :10

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_501082.2 Gene:cht-3 / 177464 WormBaseID:WBGene00016084 Length:1067 Species:Caenorhabditis elegans


Alignment Length:429 Identity:83/429 - (19%)
Similarity:156/429 - (36%) Gaps:90/429 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 FIGLGL-----------LGIQTGEVHKVGQRLV--------------CYYASDGTHNLSLLD-VP 87
            |.|:|:           .|......|::...|:              ||...:.......:| :.
 Worm   329 FAGIGISHALFDDPRGDCGTDPLPAHRLVMELIRNTIPANPAKCTRLCYLDPEEVEETFPIDNLK 393

  Fly    88 GDLCTHINIGPATLDNATIVLPDTLRQVLQNDTRSFRAAHPQV--HLLLWIGGADSGRSFALMVA 150
            .|.|:||.:....||.:..::.:...:.|......:|:...:|  .|:|.:|...:...:..::.
 Worm   394 SDYCSHIVVPYFALDLSDKMIEEDKAEDLVKKIDDWRSKIVEVAPRLILSVGSKQASTIWQFLLG 458

  Fly   151 NHAMRKLFLRSLREILRTYPSLDGIDLDW-EFPSAYDRERMHLSQLLYEIRTEWRREKRTNDILS 214
            |...||.....|.:.:.: .:.||:::.| ..|...|.::.:|...:.:|..     ..|..::.
 Worm   459 NDFHRKELAEGLVKAINS-TNADGLEISWTSQPMVSDFDKKNLKSFINDIVA-----ADTAKMVE 517

  Fly   215 LAVAAPEGIAFY-AYDIREINLYADYVNLMSYDFHFYREDTPFTGLNAPLYARSQERSLMATFNI 278
            :.||..:..|:. .||...:|..|..:.|.|:..|  .:..||||..:||.|.|.        ..
 Worm   518 IVVATSQQSAYSDFYDYEHLNKTASLIVLHSHRLH--SDSLPFTGHPSPLRATSS--------MT 572

  Fly   279 NYTVQW------WLKSGLEPQRLVVGLPTYGHSFTLVNPLNHRIGAPASGYGKCGQLGFTTLTET 337
            |..:.|      |::..:.|.:||:.|.....|...:..:......|      .||..|.::..:
 Worm   573 NQKMSWESLLSHWVEKRVLPSKLVLSLSASTLSMQSLADVRSSAATP------FGQSAFVSMLRS 631

  Fly   338 CECVTKFFKPNLSYDAESCS-----------------PYLSALQEWISYENQTSIACKANYVKSL 385
                   .|.::....|.|.                 |||....:.::|||..|...||.:....
 Worm   632 -------KKGDIHSQQEICESLKSGTGVTHWVDGAEVPYLRRYDQMVAYENTRSAHIKAVWASME 689

  Fly   386 NLGGVMVFSLNTDDLKNSCSIMPNLKYSEKPVFPLTQAI 424
            .:||:.:.:::.||        |:.....:..||:..|:
 Worm   690 GVGGLALHNMHQDD--------PSAVCDNRTAFPILNAL 720

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 72/371 (19%)
cht-3NP_501082.2 Glyco_18 51..334 CDD:214753 2/4 (50%)
Glyco_18 375..702 CDD:214753 71/355 (20%)
Glyco_hydro_18 760..1043 CDD:425828
Blue background indicates that the domain is not in the aligned region.

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