DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cht11 and cht-2

DIOPT Version :9

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_495798.2 Gene:cht-2 / 174363 WormBaseID:WBGene00011757 Length:626 Species:Caenorhabditis elegans


Alignment Length:402 Identity:96/402 - (23%)
Similarity:180/402 - (44%) Gaps:54/402 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    33 VCWSALLFSLLCLCLGFIGLGLLGIQTGEV--HKVGQRLVCYYASDGTHNLSLLDVPGDLCTHIN 95
            |.|..:||               |:..|.:  ...|:|.|.|..|.|.|  ...|...:..||:.
 Worm    11 VVWITVLF---------------GVSNGGILDRSCGRRRVGYITSWGKH--PFRDDQAEKLTHLV 58

  Fly    96 IGPATLD-NATIVLPDTLRQVLQNDTRSFRAAHPQVHLLLWIGGADSGRSFALMVANHAMRKLFL 159
            .....:| :.::.|.....:......:...:.||.:.||..:||.::.:.|:::.|:|:.|.:.:
 Worm    59 FAFFVVDSDGSVKLEGDAAKARLEHVKEVASRHPDLKLLYAVGGWENSQYFSVLTADHSRRSILI 123

  Fly   160 RSLREILRTYPSLDGIDLDWEFP------SAYDRERMHLSQLLYEIRTEWR---REKRTNDILSL 215
            .:..::::.| ..||:|:|||:|      .....:|.:...|:.|:|.|.|   .|...:.::|.
 Worm   124 SNFVKVIKEY-GFDGVDIDWEYPVTGGAVEGTPADRRNYVNLMRELRNELRDLESETGKSYLISF 187

  Fly   216 AVAAPEGIAFYAYDIREINLYADYVNLMSYDFH--FYREDTPFTGLNAPLYARSQERSLMATFNI 278
            |.||...:....||::::..|.|:||:||||:.  :..:...:||..|||.. :..:......|:
 Worm   188 AGAAGHWVLKPGYDLQQLMKYCDFVNVMSYDYFGAWASKWGAYTGPPAPLQF-AMPKKFSGRMNV 251

  Fly   279 NYTVQWWLKSGLEPQRLVVGLPTYGHSFTLVNPL------NHRIGAPASGYG---KCGQLGFTTL 334
            :.|::.:........::.:|:|.||..:..|...      ..|.....:..|   :.|.:.:..|
 Worm   252 HATMKDYSCQIKATDKINMGVPFYGRFWKNVGDAVDSTDDMWRTATATNSEGTKFEGGDVQWRDL 316

  Fly   335 TETCECVTKFFKPNLSYDAESCSPY--LSALQEWISYENQTSIACKANYVKSLNLGGVMVFSLNT 397
            .|      ||......:.:.|.:|:  ||..:.::.|||..|:..|.:|:...|:||||:::::.
 Worm   317 HE------KFDTTKTKFHSGSKTPFIWLSEQKTFVGYENAESLKHKVDYIVENNIGGVMIWAIDF 375

  Fly   398 DD----LKNSCS 405
            ||    |.||.:
 Worm   376 DDDQGTLLNSAA 387

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 84/352 (24%)
GH18_chitinase-like 69..428 CDD:299167 88/364 (24%)
cht-2NP_495798.2 Glyco_18 33..376 CDD:214753 84/352 (24%)
GH18_chitinase-like 35..376 CDD:299167 83/350 (24%)
ChtBD1_GH18_2 418..469 CDD:211315
ChtBD1_GH18_2 496..547 CDD:211315
ChtBD1_GH18_2 567..618 CDD:211315
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG3325
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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