DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Cht11 and si:ch211-226m16.2

DIOPT Version :10

Sequence 1:NP_572361.1 Gene:Cht11 / 31630 FlyBaseID:FBgn0029913 Length:432 Species:Drosophila melanogaster
Sequence 2:NP_001191302.1 Gene:si:ch211-226m16.2 / 100003708 ZFINID:ZDB-GENE-030131-2302 Length:410 Species:Danio rerio


Alignment Length:406 Identity:90/406 - (22%)
Similarity:140/406 - (34%) Gaps:124/406 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    40 FSLLCLCLGFIGLGLLGIQTGEVHKVGQRLVCYYASDGTHNLSLLDVPGDLCTHINIGPATLDNA 104
            |:.|||.:.      :|.|     :...||.||           |||   |..|...|..|    
Zfish     7 FAFLCLVVS------VGAQ-----RTQSRLSCY-----------LDV---LTPHTREGSCT---- 42

  Fly   105 TIVLPDT-------LRQVLQNDTRSF-RAAHPQVHLLLWIGGADSGRSFALMVANHAMRKLFLRS 161
            .|:||..       |:.:.:|:..:. |.......|.:.:|.........||.||.|....|:::
Zfish    43 HIILPSVSSDDELYLQSLTENEYDAIQRMKERNSALKILLGLEIKSSRLKLMSANEASVGSFIQT 107

  Fly   162 LREILRTYPSLDGIDLDWEFPSAYDRERMHLSQLLYEIRTEWRREKRTNDILSLAVAAPEGIAFY 226
            |...|:. ..|||:|:.|...:..|.|.  .:..|..|:..:..|.|.. :||.:|..|......
Zfish   108 LLTYLKE-KRLDGLDVIWLDGTPSDTEL--FTDFLKSIKGVFEEEMRPL-LLSASVKEPTDKTVA 168

  Fly   227 AYDIREINLYADYVNLMSYDFHFYREDTPFTGLNAPLYARSQERSLMATFNINYTVQWWLKSGLE 291
            :||.:.::.|.|::::                |.|.|....|        .|:.|.|.|....::
Zfish   169 SYDEQILSQYVDFISI----------------LPAQLQTDGQ--------YISKTAQHWQDKQVD 209

  Fly   292 PQRLVVGLPTY--------------GHSFTL--------VNPLNHRIGAPASGYGKCGQLGFTTL 334
            .|:|.:.:|.:              .|..|.        |:.||..:|.......|.|||.|.||
Zfish   210 LQKLGLVMPGFLQRSRHRHHHRNHPKHDDTTAEEGKKDHVHLLNLYLGDQVCQAVKSGQLQFITL 274

  Fly   335 TETCECVTKFFKPNLSYDAESCSPYLSALQEWISYENQTSIACKANYVKSLNLGGVMVFSLNTDD 399
            |..               ::..||....||:                    ..||:.|..::.|.
Zfish   275 TSV---------------SDEQSPIKEVLQQ--------------------GFGGIGVVLIDLDV 304

  Fly   400 LKNSCSIMPNLKYSEK 415
            ..|  |:.||:...|:
Zfish   305 FGN--SMCPNMTQKER 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cht11NP_572361.1 Glyco_18 68..398 CDD:214753 78/359 (22%)
si:ch211-226m16.2NP_001191302.1 GH18_chitinase-like 41..>185 CDD:471972 36/167 (22%)

Return to query results.
Submit another query.