DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14435 and RHA2A

DIOPT Version :10

Sequence 1:NP_572359.2 Gene:CG14435 / 31628 FlyBaseID:FBgn0029911 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_172962.1 Gene:RHA2A / 838073 AraportID:AT1G15100 Length:155 Species:Arabidopsis thaliana


Alignment Length:80 Identity:23/80 - (28%)
Similarity:38/80 - (47%) Gaps:14/80 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   223 VCNKFVLPDDIECHLVMCLTKPRLSYNEDVLSDAKG---ECVICLEDLSPGDTIARLPCLCIYHK 284
            :.|..||.|.:..:.:       .||.   ..|..|   :||:||..|..|:.:.:|.|..::||
plant    56 LANIIVLADQLSLNRL-------FSYR---CGDGGGGGSDCVVCLSKLKEGEEVRKLECRHVFHK 110

  Fly   285 GCIDRWF-EVNRSCP 298
            .|::.|. :.|.:||
plant   111 KCLEGWLHQFNFTCP 125

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14435NP_572359.2 mRING-CH-C4HC2H_ZNRF2 248..303 CDD:438356 18/55 (33%)
RHA2ANP_172962.1 RING_Ubox 84..129 CDD:473075 15/42 (36%)

Return to query results.
Submit another query.