DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14435 and rlim

DIOPT Version :10

Sequence 1:NP_572359.2 Gene:CG14435 / 31628 FlyBaseID:FBgn0029911 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_001016091.1 Gene:rlim / 548845 XenbaseID:XB-GENE-492020 Length:639 Species:Xenopus tropicalis


Alignment Length:424 Identity:86/424 - (20%)
Similarity:134/424 - (31%) Gaps:162/424 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KASTPATSGQQSPRSRTFSSSSTGAADSALQQQQHQHSNPGQNRGGNGGGGGGNDTTGQGFNLLR 68
            :|..|.....|...|:|..:|||..|:.: .:.:|..|:..||      ....|:|.|..    |
 Frog   233 QAVEPPIRRAQHSSSQTVDASSTEEAEGS-SRTRHHVSSQMQN------SSSSNETEGSS----R 286

  Fly    69 TLPGLQVYHNQNSTSIDRQRARSL--SSVPDIQQQAQQQQQQGSITSSGSSPH-SHPHAAHGHPA 130
            |        .|:.|:  ||:|...  .|....|.|:|.|.|..|.|.|.|:.| |:|.:.     
 Frog   287 T--------RQHITA--RQQALGTEGQSQSQTQTQSQSQTQTQSQTQSQSTVHLSNPESR----- 336

  Fly   131 VGVTVSVSGNANANSNSNFTAAG---------------------------NNNGSAMQ------S 162
               :.|.....:::||:..|..|                           |...|..|      :
 Frog   337 ---SSSQPPQTDSSSNAETTGTGQRPPTIVLDLQVRRVRPGDYRQRDSIANRTRSRSQTPNNTVT 398

  Fly   163 YMQQ----RRTLGDS---------------IRDMSMTGGSIAESIALAA---------------- 192
            |..:    |||...|               ||.:..||.|...|:|:..                
 Frog   399 YESERGGFRRTFSRSERAGVRTYVSTIRIPIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFM 463

  Fly   193 ---SATSANGIGRVYTATSLPSHIWSFNGIKCP-------------------------------- 222
               :.|..|....|....::|....:....:.|                                
 Frog   464 YNDNDTDPNNPTPVSPPAAVPGEAQNLVSPEPPAPIVEPPEPVAPVESEEGSNVSTSSARREGRN 528

  Fly   223 -----------------VCNKFVLPDDIECHLVMCLTKPRL------SYNEDVLSDAKGECVICL 264
                             :...|:|.:| :......|||.::      ::.|   :||...|.:|:
 Frog   529 SRGGVTFEESGSLPFLSLAQFFLLNED-DDDQPRGLTKEQIDNLSTRNFGE---NDALKTCSVCI 589

  Fly   265 EDLSPGDTIARLPCLCIYHKGCIDRWFEVNRSCP 298
            .:.:.|:.:.:|||...||..|||||...|.:||
 Frog   590 TEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCP 623

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14435NP_572359.2 mRING-CH-C4HC2H_ZNRF2 248..303 CDD:438356 19/51 (37%)
rlimNP_001016091.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..28
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 67..403 45/198 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 467..534 5/66 (8%)
RING-H2_RNF12 583..633 CDD:438336 16/41 (39%)
PDZ-binding. /evidence=ECO:0000255 636..639
Blue background indicates that the domain is not in the aligned region.

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