DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG14435 and Rnf150

DIOPT Version :10

Sequence 1:NP_572359.2 Gene:CG14435 / 31628 FlyBaseID:FBgn0029911 Length:303 Species:Drosophila melanogaster
Sequence 2:XP_017168354.1 Gene:Rnf150 / 330812 MGIID:2443860 Length:450 Species:Mus musculus


Alignment Length:158 Identity:34/158 - (21%)
Similarity:52/158 - (32%) Gaps:66/158 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   141 ANANSNSNFTAAGNNNGSAMQSYMQQRRTLGDSIRDMSMTGGSIAESIALAASATSANGIGRVYT 205
            |||...:.:|.|   .|...|.|   ||.|||:.:          ::|:.....|...|      
Mouse   237 ANARDRNQYTIA---TGQDWQLY---RRRLGDAAK----------KAISKLQVRTIRKG------ 279

  Fly   206 ATSLPSHIWSFNGIKCPVCNKFVLPDDIECHLVMCLTKPRLSYNEDVLSDAKGECVICLEDLSPG 270
                                                       :::..||. ..|.:|:|...|.
Mouse   280 -------------------------------------------DKETESDF-DNCAVCIEGYKPN 300

  Fly   271 DTIARLPCLCIYHKGCIDRWFEVNRSCP 298
            |.:..|||..::||.|:|.|...:|:||
Mouse   301 DVVRILPCRHLFHKSCVDPWLLDHRTCP 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14435NP_572359.2 mRING-CH-C4HC2H_ZNRF2 248..303 CDD:438356 18/51 (35%)
Rnf150XP_017168354.1 PA_GRAIL_like 45..192 CDD:239037
RING-H2_RNF150 282..336 CDD:438456 18/48 (38%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.