DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG14435 and rnf-126

DIOPT Version :10

Sequence 1:NP_572359.2 Gene:CG14435 / 31628 FlyBaseID:FBgn0029911 Length:303 Species:Drosophila melanogaster
Sequence 2:NP_491091.1 Gene:rnf-126 / 171875 WormBaseID:WBGene00021842 Length:304 Species:Caenorhabditis elegans


Alignment Length:327 Identity:59/327 - (18%)
Similarity:85/327 - (25%) Gaps:169/327 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 QKASTPATSGQQSPRS----------------RTFSSSSTGAAD---SALQQQQHQHSN------ 42
            |:..||... |..||:                ..|.....|||:   ||.||||..|.|      
 Worm    88 QEPETPQAE-QPQPRAAAGGREQQHTLEEFIRNMFRPDPRGAAEEAASAQQQQQQPHPNVTFSFQ 151

  Fly    43 -PG----QNRGGNGGGGGGNDTTGQGFNLLRTLPGLQVYHNQNSTSIDRQRARSLSSVPDIQQQA 102
             ||    |......||||||:..|..|       |:::          .:||...|::.:|..|.
 Worm   152 MPGGIGVQIHAHTAGGGGGNNPDGMPF-------GMEI----------GERADLESAMQEILAQF 199

  Fly   103 QQQQQQGSITSSGSSPHSHPHAAHGHPAVGVTVSVSGNANANSNSNFTAAGNNNGSAMQSYMQQR 167
            |                                 .:|.........||.|      .::.|:..:
 Worm   200 Q---------------------------------AAGGEGGQRQGGFTEA------EVKEYLPMK 225

  Fly   168 RTLGDSIRDMSMTGGSIAESIALAASATSANGIGRVYTATSLPSHIWSFNGIKCPVC-NKFVLPD 231
            :...:.|.                                         ||.:|..| :.|.|.:
 Worm   226 KVTQEHID-----------------------------------------NGAQCTTCFDTFKLDE 249

  Fly   232 DIECHLVMCLTKPRLSYNEDVLSDAKGECVICLEDLSPGDTIARLPCLCIYHKGCIDRWFEVNRS 296
            |                                        :..|.|..|:|:.||:.|.:...|
 Worm   250 D----------------------------------------VGALDCNHIFHRPCIEPWLKTKNS 274

  Fly   297 CP 298
            ||
 Worm   275 CP 276

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG14435NP_572359.2 mRING-CH-C4HC2H_ZNRF2 248..303 CDD:438356 10/51 (20%)
rnf-126NP_491091.1 zinc_ribbon_9 3..34 CDD:433910
RING-H2_PA-TM-RING 237..279 CDD:438118 15/80 (19%)
Blue background indicates that the domain is not in the aligned region.

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