DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and taar11

DIOPT Version :10

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001076546.1 Gene:taar11 / 794647 ZFINID:ZDB-GENE-041014-52 Length:327 Species:Danio rerio


Alignment Length:297 Identity:80/297 - (26%)
Similarity:134/297 - (45%) Gaps:38/297 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 HLLWLAINAFLFVLILGGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCVG-LALPYHLV---- 109
            :||::    ...:||:.||:..|..:...:.|.:. :|..|||:||||..:| ..:|..::    
Zfish    38 YLLFI----IAIILIVFGNLWVICTISFFQQLHTP-TNYLILSMAVSDLLLGSFVMPPSMLRSLE 97

  Fly   110 --FYMGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIII 172
              :|.|...      |..........|..|:|.|:.|::|||.||....||:..||.||:..:|:
Zfish    98 TCWYFGDFF------CKFHSATDFTLCNASVLHLVFISIDRYYAVCQPFHYQSRMTTRVSVFMIL 156

  Fly   173 FNWC------LGALVALLPVFWNRWPDAQ-ACEFDEVLAPGYIAGVITPGFVIIWICMFLV---Y 227
            .:|.      .|.:.:.|.:...|..:.. ||:...:...|...|| |...|..::.||::   |
Zfish   157 ISWSFSAFFGFGIIFSELKIEKKRTEELHVACKGGCLALHGREIGV-TYSLVFYFLPMFIIVSLY 220

  Fly   228 WRIMREASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQL 292
            .|:...|.|. :|:..|.. ::..||.|       |.|:.:.:..|:|.|..||.|||...|...
Zfish   221 SRVFIIALKH-VRVINSAA-SSLSATKM-------DLKATKTLAIIIGVFMSCWTPYFMCNIIDP 276

  Fly   293 FSICQSSSMIYKTTFSLAIANSALNPIIYSWKNSGFR 329
            .......:::|:....:|..|:..||::|::..|.||
Zfish   277 IVNHTIPALLYEVLMWVAYLNAVFNPLVYAFFYSWFR 313

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 75/288 (26%)
TM helix 1 53..78 CDD:410626 5/24 (21%)
TM helix 2 86..111 CDD:410626 10/31 (32%)
TM helix 3 123..153 CDD:410626 10/29 (34%)
TM helix 4 166..185 CDD:410626 4/24 (17%)
TM helix 5 204..229 CDD:410626 8/27 (30%)
TM helix 6 261..291 CDD:410626 11/29 (38%)
TM helix 7 300..325 CDD:410626 6/24 (25%)
taar11NP_001076546.1 7tmA_TAAR1 49..313 CDD:320438 74/280 (26%)
TM helix 2 69..95 CDD:320438 10/25 (40%)
TM helix 3 107..137 CDD:320438 10/29 (34%)
TM helix 4 149..172 CDD:320438 5/22 (23%)
TM helix 5 197..226 CDD:320438 9/29 (31%)
TM helix 6 245..275 CDD:320438 12/36 (33%)
TM helix 7 284..309 CDD:320438 6/24 (25%)

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