DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and Gpr21

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001103024.1 Gene:Gpr21 / 689917 RGDID:1586383 Length:349 Species:Rattus norvegicus


Alignment Length:338 Identity:95/338 - (28%)
Similarity:141/338 - (41%) Gaps:60/338 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LLWLAINAFLFVLILGGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGLA--LP-YHLVFYM 112
            ||.:.|..||.|||:.|||:.|........|....::.||.::|.:|..||::  :| ..|::|.
  Rat    29 LLEVLIVVFLTVLIISGNIIVIFVFHCAPLLNHHSTSYFIQTMAYADLLVGVSCLVPSLSLLYYP 93

  Fly   113 GSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCL 177
            .....||  .|.:..|::.....:||.:|..|::|||||:...|.|...:|.......|...|..
  Rat    94 LPMEEAM--TCQVFGFIVSVLKSISMASLACISIDRYIAITKPLTYNTLVTPWRLRLCIFLIWLY 156

  Fly   178 GALVALLPVF--WNRWPDAQACEFDEVLAPGYIAGVI--------TPGFVIIWICMFL------- 225
            ..|| .||.|  |.:              |||...|.        |..:..::|.|.|       
  Rat   157 STLV-FLPSFFHWGK--------------PGYHGDVFRWCAESWHTNSYFTLFIVMTLYAPAALI 206

  Fly   226 ---VYWRIMR-------EASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLC 280
               .|:.|.|       |.|::..|. .|....|.||.|.      ||.:...::..|...|.:.
  Rat   207 VCFTYFNIFRICQQHTKEISERQARF-SSQNGETGEAQTC------PDKRYAMVLFRITSVFYVL 264

  Fly   281 WLPYFCVAIAQLFSICQSSSMIYKTTFSLAIANSALNPIIYSWKNSGFR---RAFVQTLC--CRT 340
            ||||....:.:..:.|.|....:.||: |||:||..|.||||..||.|:   :...:::|  |.:
  Rat   265 WLPYIIYFLLESSTGCSSRLASFLTTW-LAISNSFCNCIIYSLSNSVFQQGLKGLSESVCTSCAS 328

  Fly   341 ARQCEDQLPADSK 353
            ....:|.....||
  Rat   329 HTTAKDPYTVRSK 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 85/303 (28%)
7tm_1 67..321 CDD:278431 76/283 (27%)
Gpr21NP_001103024.1 7tm_classA_rhodopsin-like 31..308 CDD:410626 85/301 (28%)
TM helix 1 31..55 CDD:410626 10/23 (43%)
TM helix 2 65..87 CDD:410626 7/21 (33%)
TM helix 3 103..125 CDD:410626 5/21 (24%)
TM helix 4 148..164 CDD:410626 5/16 (31%)
TM helix 5 189..212 CDD:410626 3/22 (14%)
TM helix 6 251..273 CDD:410626 6/21 (29%)
TM helix 7 283..308 CDD:410626 12/25 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24249
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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