DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and LOC571410

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_693932.2 Gene:LOC571410 / 571410 -ID:- Length:338 Species:Danio rerio


Alignment Length:339 Identity:88/339 - (25%)
Similarity:157/339 - (46%) Gaps:37/339 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LLWLAINAFLFVLILGGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGL-ALPYHLVFYMGS 114
            |::..:...:.|....||:|.|.||.:.|.||.. :..|::||||:|..||| |:|  |...:..
Zfish     7 LIYTVLEVLISVGCCLGNVLVIWAVWSSRALRQT-TFCFVVSLAVADLLVGLVAVP--LAVLVDG 68

  Fly   115 DIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCLGA 179
            .:......||:...|::.....|:.:|::||||||:.|...|.||..:.::..:..:...|...|
Zfish    69 RLKTSFHSCLIISCLVLVLTQASVHSLLAIAVDRYLRVYNPLRYRGAVKKQHLWIAVTVCWLSAA 133

  Fly   180 LVALLPVF-WNRWPDAQA------CEFDEVLAPGYI------AGVITPGFVIIWICMFLVYWRIM 231
            ::.|:|:| |::.....:      |||..|:...|:      |.::.|.|:     |.|:|..|.
Zfish   134 ILGLIPMFGWHKENTTTSENSTITCEFISVIPMSYMVNFIFFACLLPPTFI-----MMLIYLLIF 193

  Fly   232 REASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLP-YFCVAIAQLFSI 295
            ...|||   ||:.|     ......|.....:.|....:..::..|.:|||| :...|:...::.
Zfish   194 TMISKQ---LRKGV-----GRGMAPNSFYQKEQKLATSLALVLVLFAVCWLPLHIMNALNYYYTN 250

  Fly   296 CQSSSMIYKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLCCRTARQCEDQLPADSKHRMEATS 360
            .:...:.:.....|:..|||:|||:|::|....|.|:...|...|:.:.:.:..:.:.....:|:
Zfish   251 IEVPVLAFHIGILLSHFNSAVNPIVYAFKVPKIRMAYKSILMKLTSSEQKAEQSSQTWDNNGSTN 315

  Fly   361 S------SQEIKPK 368
            |      :.:|||:
Zfish   316 SNNTARCTMKIKPQ 329

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 79/285 (28%)
7tm_1 67..321 CDD:278431 75/268 (28%)
LOC571410XP_693932.2 7tm_4 22..>112 CDD:304433 34/92 (37%)
7tm_1 23..276 CDD:278431 75/268 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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