DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and LOC567498

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_005159907.1 Gene:LOC567498 / 567498 -ID:- Length:398 Species:Danio rerio


Alignment Length:401 Identity:107/401 - (26%)
Similarity:157/401 - (39%) Gaps:105/401 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 FTSSSSPAWDYRSSPEALGVVPFLWQHQNATETPTEITLQATSFGAGHLLWLAINAFLFVLILGG 67
            ||:|.:|:|.....|                              ||.:......:.|.:..|.|
Zfish     4 FTTSMTPSWSVHGEP------------------------------AGRVFLGCALSLLVLWTLLG 38

  Fly    68 NILTIVAVRTCRHLRSVISNLFILSLAVSDFCVG-LALPY--------HLVFYMGSDIGAMRGPC 123
            |.:...||...||||..::|:||:|||:||..|. |.:|:        |..|  ||         
Zfish    39 NFMVCAAVLRFRHLRGKVTNVFIVSLAMSDLLVAVLVMPWKAATEVTGHWAF--GS--------- 92

  Fly   124 LLRFFLLICACCV---------SMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCLGA 179
                   .|.|.|         |:|.|..|::|||.|:.....|.|.|.||||..::...|.:..
Zfish    93 -------FCECWVAFDIMCSTASILNLCVISLDRYWAISDPFQYERKMNRRVALVMVSVTWIVSV 150

  Fly   180 LVALLPV--FWNR----------WPDAQACEFDEVLAPGYIAGVITPGFVIIWICMFLVYWRIMR 232
            .::.:||  .|:|          |...:.|  |..|:..|........|.|....|.:.|.||.|
Zfish   151 AISFVPVQLNWHRADLDTVNTSNWTTKEMC--DSSLSRSYAISSSLISFYIPVAVMLVTYTRIYR 213

  Fly   233 EAS---------KQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVA 288
            .|.         ::|....||..............:  .:.|..:.:..|||.|..||.|:|.:.
Zfish   214 IAQIQIKSISSLERAAERAQSCSAGARTCPLQHRAI--RETKLFKTLSVIMGVFVCCWFPFFVLN 276

  Fly   289 IAQLFSICQSSSMIYKTTFSLAI----ANSALNPIIYSWKNSGFRRAFVQTLCCR-------TAR 342
            .|..|  |.....:.:.||::.:    .||:||||||:: ||.||.||.:.||||       ...
Zfish   277 CAVPF--CHKPDCVSEATFNVFVWFGWCNSSLNPIIYAF-NSDFRDAFARLLCCRGLCSKTPVGV 338

  Fly   343 QCEDQLPADSK 353
            ||:|.:..:::
Zfish   339 QCKDPVAINNQ 349

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 89/313 (28%)
7tm_1 67..321 CDD:278431 82/296 (28%)
LOC567498XP_005159907.1 7tm_1 38..311 CDD:278431 82/296 (28%)
7tm_4 <104..>156 CDD:304433 16/51 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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