DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and Oamb

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001262774.1 Gene:Oamb / 43982 FlyBaseID:FBgn0024944 Length:751 Species:Drosophila melanogaster


Alignment Length:608 Identity:116/608 - (19%)
Similarity:172/608 - (28%) Gaps:313/608 - (51%)


- Green bases have known domain annotations that are detailed below.


  Fly    34 ETPTEITLQATSF-GAGHLLWLAINAFLFVLILGGNILTIVAVRTCRHLRSVISNLFILSLAVSD 97
            ||..|..:::..: ...:|:.||:..|:.||::|||.|.|.||.....|||| :|.||::|||:|
  Fly     3 ETECEDLIKSVKWTEPANLISLAVLEFINVLVIGGNCLVIAAVFCSNKLRSV-TNFFIVNLAVAD 66

  Fly    98 FCVGLA-LPYHLVF-----YMGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYAL 156
            ..|||| ||:...:     ::..|:.     |.:...:.:..|..|:|.|.:|::|||:||...:
  Fly    67 LLVGLAVLPFSATWEVFKVWIFGDLW-----CRIWLAVDVWMCTASILNLCAISLDRYVAVTRPV 126

  Fly   157 HYRRYMTRRVAYSIIIFNWCLGALVALLPVFWNRWPDAQACEFDEVLAPGYIAGVIT-------- 213
            .|...|:.:.|.|:|...|.|...:...|:.  .|.|.:|     |:.|.|..|..|        
  Fly   127 TYPSIMSTKKAKSLIAGIWVLSFFICFPPLV--GWKDQKA-----VIQPTYPKGNHTLYYTTTMS 184

  Fly   214 -------------------------------------PGFVII---------------------- 219
                                                 |||..|                      
  Fly   185 SSEDGQLGLDSIKDQGEASLPPSPPHIGNGNAYNPYDPGFAPIDGSAEIRIAAIDSTSTSTTATT 249

  Fly   220 -----------------------------------WIC-----------------------MFLV 226
                                               |.|                       |...
  Fly   250 TTTASSSSTTETEMDLDLLNAPPQNRPQTISGSCPWKCELTNDRGYVLYSALGSFYIPMFVMLFF 314

  Fly   227 YWRIMREA--------------------------------------------------------- 234
            ||||.|.|                                                         
  Fly   315 YWRIYRAAVRTTRAINQGFKTTKGSKGIGSRFEEQRLTLRIHRGRGSNQQDSMHSNGSTQSTTTT 379

  Fly   235 ---------SKQALR-------LRQSVVY------------------------------------ 247
                     ||.|.|       ::.||.|                                    
  Fly   380 LGTPSPERLSKYATRRLHHHDKIKISVSYPSSENISELAGHGDVGHERRQSGNALFAVHYNGTNG 444

  Fly   248 -------------------------------------NTDEA------------TTMRNL----- 258
                                                 ||.||            ...||:     
  Fly   445 RESTESQLYRQQQQHGVASSCYLQVGKGLPELARRQSNTSEAGGSGHSRPANKKMGRRNIKAQVK 509

  Fly   259 LLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQS--SSMIYKTTFSLAIANSALNPIIY 321
            ....:.|:.:.:..|:|.|..||.|:|.:.|.:.|  ||.  ..:::...|.|...|||:||:||
  Fly   510 RFRMETKAAKTLAIIVGMFIFCWCPFFTMYIIRPF--CQDCVDPLLFSVLFWLGYCNSAVNPMIY 572

  Fly   322 SWKNSGFRRAFVQTLC-CRTARQ 343
            :..:..||.||.:.:| |..:||
  Fly   573 ALFSKDFRFAFKRIICRCFCSRQ 595

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 103/566 (18%)
7tm_1 67..321 CDD:278431 96/549 (17%)
OambNP_001262774.1 7tm_4 29..>154 CDD:304433 46/130 (35%)
7tm_1 37..>181 CDD:278431 51/156 (33%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45460599
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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