DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-C and Taar7d

DIOPT Version :10

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001010838.1 Gene:Taar7d / 435206 MGIID:3527443 Length:358 Species:Mus musculus


Alignment Length:346 Identity:87/346 - (25%)
Similarity:150/346 - (43%) Gaps:44/346 - (12%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 ALGVVPFLWQHQNA------TETPTEITLQ-------ATSFGAG-HLLWLAINAFLFVLILGGNI 69
            |.|...|.|...:.      :.|.||:..:       .:.:..| .|:..|:..|..||.:.||:
Mouse     2 ATGDDSFPWDQDSILSRDLFSATSTELCYENLNRSCVRSPYSPGPRLILYAVFGFGAVLAVCGNL 66

  Fly    70 LTIVAVRTCRHLRSVISNLFILSLAVSDFCVG-LALPYHLV------FYMGSDIGAMRGPCLLRF 127
            |.:.::...|.|.|. :|..:.|||.:||.|| :.:|:.:|      :|.|........ |....
Mouse    67 LVMTSILHFRQLHSP-ANFLVASLACADFLVGVMVMPFSMVRSVEGCWYFGESYCKFHS-CFEGS 129

  Fly   128 FLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCLGALVALLPVFWNRWP 192
            |     |..|:..|..|:|||||||...|.|....|..|:...|.|:|    |::::..|...:.
Mouse   130 F-----CYSSLFHLCFISVDRYIAVSDPLTYPTRFTASVSGKCITFSW----LLSIIYSFSLLYT 185

  Fly   193 DAQACEFDEVLAPGYIAG----VITPGFVIIWICMFL--------VYWRIMREASKQALRLRQSV 245
            .|.....:::::.....|    .:...:|.|...:||        ||.:|...|.:||..:.:..
Mouse   186 GANDAGLEDLVSALTCVGGCQIAVNQTWVFINFLLFLIPTLVMITVYSKIFLIAKQQAQNIEKMS 250

  Fly   246 VYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQSSSMIYKTTFSLA 310
            ......:.:.::.:...:.|:.:.:...:..|.|.|||||..:|...|....:.:.:|:....:.
Mouse   251 KQTARASESYKDRVTKRERKAAKTLGIAVAAFLLSWLPYFIDSIIDAFLGFITPTYVYEILVWIV 315

  Fly   311 IANSALNPIIYSWKNSGFRRA 331
            ..|||:||:||::..|.||:|
Mouse   316 YYNSAMNPLIYAFFYSWFRKA 336

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 74/290 (26%)
TM helix 1 53..78 CDD:410626 7/24 (29%)
TM helix 2 86..111 CDD:410626 10/31 (32%)
TM helix 3 123..153 CDD:410626 12/29 (41%)
TM helix 4 166..185 CDD:410626 5/18 (28%)
TM helix 5 204..229 CDD:410626 7/36 (19%)
TM helix 6 261..291 CDD:410626 9/29 (31%)
TM helix 7 300..325 CDD:410626 8/24 (33%)
Taar7dNP_001010838.1 7tm_GPCRs 49..337 CDD:475119 78/299 (26%)
TM helix 1 50..74 CDD:410628 7/23 (30%)
TM helix 2 83..105 CDD:410628 9/21 (43%)
TM helix 3 121..143 CDD:410628 6/27 (22%)
TM helix 4 166..182 CDD:410628 5/19 (26%)
TM helix 5 210..233 CDD:410628 5/22 (23%)
TM helix 6 272..294 CDD:410628 7/21 (33%)
TM helix 7 305..330 CDD:410628 8/24 (33%)

Return to query results.
Submit another query.