DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and Taar6

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_783174.1 Gene:Taar6 / 294124 RGDID:631384 Length:345 Species:Rattus norvegicus


Alignment Length:337 Identity:86/337 - (25%)
Similarity:149/337 - (44%) Gaps:40/337 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SSPEALGVVPFLWQHQNAT--ETPTEITLQATSFGAG-HLLWLAINAFLFVLILGGNILTIVAVR 76
            |||.|  |:...:::.|.:  :||         :..| .:|..|:..|..||.:.||:|.::::.
  Rat     5 SSPPA--VLQLCYENVNGSCVKTP---------YSPGPRVLLYAVFGFGAVLAVFGNLLVMISIL 58

  Fly    77 TCRHLRSVISNLFILSLAVSDFCVGLA-LPYHLV------FYMGSDIGAMRGPCLLRFFLLICAC 134
            ..:.|.|. :|..|.|||.:||.||:: :|:.:|      :|.|.........|.:.|      |
  Rat    59 HFKQLHSP-TNFLIASLACADFWVGVSVMPFSMVRSIESCWYFGRSFCTFHTCCDVAF------C 116

  Fly   135 CVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCLGALVALLPVFWNRWPDAQACEF 199
            ..|:..|..|::||||||...|.|....|..|:...|..:|.|....:....:...:.|......
  Rat   117 YSSLFHLSFISIDRYIAVTDPLVYPTKFTVSVSGICISISWILPLAYSGAVFYTGVYADGLEEVS 181

  Fly   200 DEVLAPGYIAGVITPGFVII--------WICMFLVYWRIMREASKQALRLRQSVVYNTDEAT--T 254
            |.|...|....|:...:|:|        .:.|.::|..|...|.:||.::  ..|.|..|::  :
  Rat   182 DAVNCVGGCQVVVNQNWVLIDFLSFLIPTLVMIILYGNIFLVARQQAKKI--ETVGNKAESSSES 244

  Fly   255 MRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQSSSMIYKTTFSLAIANSALNPI 319
            .:..:...:.|:.:.:...:..|.:.||||...::...|....:.:.||:.....|..|||:||:
  Rat   245 YKARVARRERKAAKTLGITVVAFMISWLPYSIDSLVDAFMGFITPAYIYEICVWCAYYNSAMNPL 309

  Fly   320 IYSWKNSGFRRA 331
            ||:.....|::|
  Rat   310 IYALFYPWFKKA 321

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 74/288 (26%)
7tm_1 67..321 CDD:278431 68/270 (25%)
Taar6NP_783174.1 7tmA_TAAR6_8_9 33..322 CDD:320439 77/298 (26%)
TM helix 1 35..59 CDD:320439 7/23 (30%)
TM helix 2 68..90 CDD:320439 10/21 (48%)
TM helix 3 106..128 CDD:320439 6/27 (22%)
TM helix 4 151..167 CDD:320439 3/15 (20%)
TM helix 5 195..218 CDD:320439 3/22 (14%)
TM helix 6 257..279 CDD:320439 5/21 (24%)
TM helix 7 290..315 CDD:320439 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24249
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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