DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and GPR12

DIOPT Version :10

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_005279.1 Gene:GPR12 / 2835 HGNCID:4466 Length:334 Species:Homo sapiens


Alignment Length:302 Identity:84/302 - (27%)
Similarity:137/302 - (45%) Gaps:43/302 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly    54 LAINAFLFVLILGGNILT---IVAVRTCRHLRSVISNLFIL--SLAVSDFCVGLALPYHLVFYMG 113
            |.:|.:..||...|.:::   .:.|....|..|:.:.:|:|  |||::|...|:.|..:.||...
Human    42 LVVNPWDIVLCTSGTLISCENAIVVLIIFHNPSLRAPMFLLIGSLALADLLAGIGLITNFVFAYL 106

  Fly   114 SDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNW--- 175
            ....|.:   |:...|::.:...|:.:|::|.||||:::.|||.|....|....|.:::..|   
Human   107 LQSEATK---LVTIGLIVASFSASVCSLLAITVDRYLSLYYALTYHSERTVTFTYVMLVMLWGTS 168

  Fly   176 -CLGALVALLPVF-WNRWPDAQACEFDEVLAPGYIAGVITPGFVIIWICMFLVYWRI----MREA 234
             |||    ||||. ||...|...|.....|.... |.:::..|:.::..|..:|.:|    ||.|
Human   169 ICLG----LLPVMGWNCLRDESTCSVVRPLTKNN-AAILSVSFLFMFALMLQLYIQICKIVMRHA 228

  Fly   235 SKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQS- 298
            .:.||   |.....|....|.|        |.|..:..|:|.|..||:|:      .|:|:... 
Human   229 HQIAL---QHHFLATSHYVTTR--------KGVSTLAIILGTFAACWMPF------TLYSLIADY 276

  Fly   299 --SSMIYKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLCC 338
              .|:....|...|..||.:||:||:::|...::|.. .:||
Human   277 TYPSIYTYATLLPATYNSIINPVIYAFRNQEIQKALC-LICC 317

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 80/287 (28%)
TM helix 1 53..78 CDD:410626 6/26 (23%)
TM helix 2 86..111 CDD:410626 9/26 (35%)
TM helix 3 123..153 CDD:410626 9/29 (31%)
TM helix 4 166..185 CDD:410626 6/22 (27%)
TM helix 5 204..229 CDD:410626 4/24 (17%)
TM helix 6 261..291 CDD:410626 8/29 (28%)
TM helix 7 300..325 CDD:410626 9/24 (38%)
GPR12NP_005279.1 7tmA_GPR12 45..312 CDD:320627 80/291 (27%)
TM helix 1 46..72 CDD:320627 4/25 (16%)
TM helix 2 79..104 CDD:320627 9/24 (38%)
TM helix 3 113..143 CDD:320627 9/32 (28%)
TM helix 4 155..175 CDD:320627 6/23 (26%)
TM helix 5 194..223 CDD:320627 6/29 (21%)
TM helix 6 244..274 CDD:320627 12/43 (28%)
TM helix 7 280..305 CDD:320627 9/24 (38%)

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