DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and GPR6

DIOPT Version :10

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001273028.1 Gene:GPR6 / 2830 HGNCID:4515 Length:377 Species:Homo sapiens


Alignment Length:306 Identity:83/306 - (27%)
Similarity:137/306 - (44%) Gaps:34/306 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    45 SFGAGHLLWLAINAFLFVL------ILGGNILTIVAVRTCRHLRSVISNLFIL--SLAVSDFCVG 101
            |.|...||..|:|.:..:|      |.|.|.|.:..:.:...||   :.:|:|  |||.:|...|
Human    76 SAGPPGLLLPAVNPWDVLLCVSGTVIAGENALVVALIASTPALR---TPMFVLVGSLATADLLAG 137

  Fly   102 LALPYHLVFYMGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRV 166
            ..|..|.||..   :.......||....|:.:...|:.:|::|.||||:::..||.|....|...
Human   138 CGLILHFVFQY---LVPSETVSLLTVGFLVASFAASVSSLLAITVDRYLSLYNALTYYSRRTLLG 199

  Fly   167 AYSIIIFNWCLGALVALLPVF-WNRWPDAQACEFDEVLAPGYIAGVITPGFVIIWICMFLVYWRI 230
            .:.::...|.:...:.||||. ||...:..||.....||..::| :::..|.:::..|..:|.||
Human   200 VHLLLAATWTVSLGLGLLPVLGWNCLAERAACSVVRPLARSHVA-LLSAAFFMVFGIMLHLYVRI 263

  Fly   231 MREASKQA--LRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPY--FCVAIAQ 291
            .:...:.|  :.|:|..:.....|.|.         |.|..:..::|.|...|||:  :||..:.
Human   264 CQVVWRHAHQIALQQHCLAPPHLAATR---------KGVGTLAVVLGTFGASWLPFAIYCVVGSH 319

  Fly   292 LFSICQSSSMIYKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLC 337
                 :..::....|...|..||.:|||||:::|...:||....||
Human   320 -----EDPAVYTYATLLPATYNSMINPIIYAFRNQEIQRALWLLLC 360

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 74/284 (26%)
TM helix 1 53..78 CDD:410626 7/30 (23%)
TM helix 2 86..111 CDD:410626 10/26 (38%)
TM helix 3 123..153 CDD:410626 10/29 (34%)
TM helix 4 166..185 CDD:410626 2/18 (11%)
TM helix 5 204..229 CDD:410626 5/24 (21%)
TM helix 6 261..291 CDD:410626 9/31 (29%)
TM helix 7 300..325 CDD:410626 9/24 (38%)
GPR6NP_001273028.1 7tmA_GPR6 88..355 CDD:320628 75/287 (26%)
TM helix 1 89..115 CDD:320628 5/25 (20%)
TM helix 2 122..147 CDD:320628 10/24 (42%)
TM helix 3 156..186 CDD:320628 10/29 (34%)
TM helix 4 198..218 CDD:320628 2/19 (11%)
TM helix 5 237..266 CDD:320628 8/29 (28%)
TM helix 6 287..317 CDD:320628 11/38 (29%)
TM helix 7 323..348 CDD:320628 9/24 (38%)

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