DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and Hrh1

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_017447930.1 Gene:Hrh1 / 24448 RGDID:2830 Length:542 Species:Rattus norvegicus


Alignment Length:495 Identity:92/495 - (18%)
Similarity:166/495 - (33%) Gaps:182/495 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    22 VVPFLWQHQNATETPTEITLQATSFGAGHLLWL-AINAFLFVLILGGNILTIVAVRTCRHLRSVI 85
            :||..:.:.::|..........|:..:..||.| .:.:.:.::.:|.|:|.:.||.:.|.|.:| 
  Rat    54 LVPMSFANTSSTFEDKMCEGNRTAMASPQLLPLVVVLSSISLVTVGLNLLVLYAVHSERKLHTV- 117

  Fly    86 SNLFILSLAVSDFCVG-LALPYHLVFYMGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRY 149
            .||:|:||:|:|..|| :.:|.::::.:.:.....|..||....:...|...|:.::..:.:|||
  Rat   118 GNLYIVSLSVADLIVGAVVMPMNILYLIMTKWSLGRPLCLFWLSMDYVASTASIFSVFILCIDRY 182

  Fly   150 IAVVYALHYRRYMTRRVAYSIIIFNWCLGALVALLPVFWNRW-PDA-----QACEFD-------E 201
            .:|...|.|.||.|:..|.:.|:..|....|..:..:.|:.: |.|     ..||.|       :
  Rat   183 RSVQQPLRYLRYRTKTRASATILGAWFFSFLWVIPILGWHHFMPPAPELREDKCETDFYNVTWFK 247

  Fly   202 VLAPGYIAGVITPGFVIIWICMFLVY--------------------------------------- 227
            ::..  |.....|..:::|..: .:|                                       
  Rat   248 IMTA--IINFYLPTLLMLWFYV-KIYKAVRRHCQHRQLTNGSLPSFSELKLRSDDTKEGAKKPGR 309

  Fly   228 ---WRIMREASK----------------------------------------------------- 236
               |.:::..|:                                                     
  Rat   310 ESPWGVLKRPSRDPSVGLDQKSTSEDPKMTSPTVFSQEGERETRPCFRLDIMQKQSMAEGDVRGS 374

  Fly   237 -----------------------------QALRLRQSVVYNTDEATTMR---------------- 256
                                         |.|..:||....||..|::.                
  Rat   375 KANDQALSQPKMDEQSLNTCRRISETSEDQTLVDQQSFSRTTDSDTSIEPGPGRVKSRSGSNSGL 439

  Fly   257 -------------------NLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQS--SS 300
                               .|.|:.:.|:.:.:.|||..|.|||:|||  ....:.:.|:|  |.
  Rat   440 DYIKITWKRLRSHSRQYVSGLHLNRERKAAKQLGFIMAAFILCWIPYF--IFFMVIAFCKSCCSE 502

  Fly   301 MIYKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLCCRT 340
            .::..|..|...||.|||:||...|..|::.|.:.|..|:
  Rat   503 PVHMFTIWLGYINSTLNPLIYPLCNENFKKTFKKILHIRS 542

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 82/445 (18%)
7tm_1 67..321 CDD:278431 77/428 (18%)
Hrh1XP_017447930.1 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166338507
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
21.930

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