DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-C and ador-1

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001040809.1 Gene:ador-1 / 174890 WormBaseID:WBGene00011878 Length:362 Species:Caenorhabditis elegans


Alignment Length:333 Identity:91/333 - (27%)
Similarity:155/333 - (46%) Gaps:45/333 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LLWLAI-NAFLFVLILGGNILTI-VAVRTCRHLRSVISNLFILSLAVSDFCVG-LALPYHLVFYM 112
            |||.|| ...|.:.|...|:|.: |.||: :|:|:| :|.:|.|||::||..| |.:|..:|..|
 Worm     4 LLWYAIAELLLSIHISFSNLLVLWVYVRS-KHVRTV-TNTYIFSLALTDFLAGALGIPLTVVSVM 66

  Fly   113 GSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRV-AYSIIIFNWC 176
            ........| ||....:|...|.:|...:::||:|:|:.:  ....|.:.:||. |..::..:|.
 Worm    67 TRKPRTFYG-CLFVHLILCILCTISTFHMLAIAIDKYVTI--CCRDRIFSSRRKRAIFLLTTSWI 128

  Fly   177 LGALVALLPVFWNRW----------PDAQACEFDEVLAPGYIAGVI------TPGFVIIWICMFL 225
            ||.|||:||:| |.:          .:.:.|.|..|:...|:..||      .|..:|: :....
 Worm   129 LGLLVAILPLF-NVFGFAETQSLFIENGEMCHFTMVVDYRYLVYVIFFSTILAPTAIIV-LLYSS 191

  Fly   226 VYWRIMREASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIA 290
            :|.||..|..:....||||          .|...:....|.::|::.::..:.:||.|.:.:...
 Worm   192 IYSRIRTEEKQVKCLLRQS----------ERERRMAGRRKLIRILLILVVSYGICWYPLYIINTI 246

  Fly   291 QLFSICQSSSMIYKTTFSLAIANSALNPIIYSWKNSGFRRAF-----VQT---LCCRTARQCEDQ 347
            ..|....|.:.:...|..::..:.||||:||::...||::|.     :||   .|...:.....:
 Worm   247 DYFWPEFSINSLTLWTVIMSHMSCALNPLIYAYGMPGFKKALRAFFNIQTDNNTCANYSCYMSFR 311

  Fly   348 LPADSKHR 355
            ..|:.|.|
 Worm   312 STANQKQR 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 78/289 (27%)
7tm_1 67..321 CDD:278431 73/272 (27%)
ador-1NP_001040809.1 7tm_GPCRs 5..288 CDD:391938 83/299 (28%)
TM helix 1 6..32 CDD:341315 9/25 (36%)
TM helix 2 39..66 CDD:341315 11/26 (42%)
TM helix 3 76..106 CDD:341315 9/31 (29%)
TM helix 4 119..137 CDD:341315 7/17 (41%)
TM helix 5 166..196 CDD:341315 6/30 (20%)
TM helix 6 217..247 CDD:341315 5/29 (17%)
TM helix 7 256..281 CDD:341315 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
32.920

Return to query results.
Submit another query.