DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and taar16g

DIOPT Version :10

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_017213581.1 Gene:taar16g / 108191509 ZFINID:ZDB-GENE-060413-19 Length:331 Species:Danio rerio


Alignment Length:308 Identity:84/308 - (27%)
Similarity:140/308 - (45%) Gaps:58/308 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 FLFVLILGG---------NILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGLAL-PYH---LV- 109
            |:||.|...         |:|.|:::.....|.|. :|:.|.|||::|..|||.| |.|   |: 
Zfish    35 FIFVYIFISTVSVLTVFLNLLVIISIAHFHQLHSP-TNVLIFSLAMADLIVGLILMPVHGLKLIE 98

  Fly   110 --FYMGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHY-RRYMTRRVAYSII 171
              :|.|...      |.:..|:.......|:..||.|:|||||||...|.| .|..|.|..:||:
Zfish    99 PCWYFGEIF------CSIFPFIFYVVVTASLGNLIIISVDRYIAVNDPLRYTTRVDTNRAVFSIV 157

  Fly   172 IFNWCLGALVALLPVFWN-RWPDA-QACEFD-------EVLAPGYIAGVITPGFVIIWICMFLVY 227
            : ||...::.:.|.::.: .:|:. ..|..:       |.:....:..::||..:||::     |
Zfish   158 V-NWVFSSIYSFLILYESVLYPEKNHTCIGECILFIKLEYIITDVLVTLVTPCCLIIYL-----Y 216

  Fly   228 WRIMREASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQL 292
            .:|...|..||    :.:...||:.........    ||:.:||.|   :.|||:||:..|:   
Zfish   217 LKIFFLAKHQA----EHINALTDKKVKSEKKAA----KSLGVVVMI---YLLCWIPYYIAAL--- 267

  Fly   293 FSICQSS--SMIYKTTFSLAIANSALNPIIYSWKNSGFR--RAFVQTL 336
             ::.|.:  |::....:.:...||.:||:||:.....||  ..::.||
Zfish   268 -TLGQDTGDSLVINIMYWILCMNSLMNPLIYAMFYRWFRISTKYILTL 314

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 80/293 (27%)
TM helix 1 53..78 CDD:410626 7/27 (26%)
TM helix 2 86..111 CDD:410626 13/31 (42%)
TM helix 3 123..153 CDD:410626 12/29 (41%)
TM helix 4 166..185 CDD:410626 4/18 (22%)
TM helix 5 204..229 CDD:410626 5/24 (21%)
TM helix 6 261..291 CDD:410626 11/29 (38%)
TM helix 7 300..325 CDD:410626 7/24 (29%)
taar16gXP_017213581.1 7tm_GPCRs 36..307 CDD:475119 81/298 (27%)
TM helix 1 38..62 CDD:410628 5/23 (22%)
TM helix 2 71..93 CDD:410628 11/21 (52%)
TM helix 3 109..131 CDD:410628 5/21 (24%)
TM helix 4 154..170 CDD:410628 4/16 (25%)
TM helix 5 194..217 CDD:410628 5/27 (19%)
TM helix 6 245..267 CDD:410628 10/28 (36%)
TM helix 7 276..301 CDD:410628 7/24 (29%)

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