DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and gpr52

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_021325264.1 Gene:gpr52 / 101884270 ZFINID:ZDB-GENE-050208-696 Length:370 Species:Danio rerio


Alignment Length:342 Identity:96/342 - (28%)
Similarity:154/342 - (45%) Gaps:45/342 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 LLWLAINAFLFVLILGGNILTIVAVRTCRH-LRSVISNLFILSLAVSDFCVGLA--LP-YHLVFY 111
            :|..|:...|.|||:.|| ||::.|..|.. |....::.||.::|.:|..|||:  :| ..|:.|
Zfish    43 VLETAVIVLLTVLIIAGN-LTVIFVFHCAPLLHHYTTSYFIQTMAYADLLVGLSCLVPTLSLLHY 106

  Fly   112 MGSDIGAMRGP--CLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFN 174
            .    ..::.|  |.:..:::.....|||..|..|:||||:|:...|.|.:.:|.......||..
Zfish   107 P----AGVQEPITCQVFSYIISVLKSVSMACLACISVDRYLAITKPLSYNQLVTPCRLRCCIILI 167

  Fly   175 WCLGALVALLPVF--------------W--NRWPDAQACEFDEVLAPGYIAGVI-TPGFVIIWIC 222
            | :.:.|..||.|              |  |.||.:       .|..|::..:: .|..:::...
Zfish   168 W-IYSCVVFLPSFFGWGKPGYHGDIFEWCANSWPTS-------ALFTGFVVCLLYAPAALVVCFT 224

  Fly   223 MFLVYWRIMREASKQALRLRQSVVYNTDEATTMRNLLLH-PDWKSVQIVVFIMGCFTLCWLPYFC 286
            .|.:: ||.::.:::....|........|.|...|...| ||.:...::..|...|.:.||||..
Zfish   225 YFHIF-RICQQHNREISERRARFPSQEMETTEGGNPAGHGPDRRYAMVLFRITSVFYMLWLPYIF 288

  Fly   287 VAIAQLFSICQSSSMIYKTTFSLAIANSALNPIIYSWKNSGFR---RAFVQTLCCRTA-RQC--E 345
            ..:.:...:..|.::.:.||: |||:||..|.:|||..||.||   |...||||...: ..|  :
Zfish   289 YFLLESSHVLDSPALSFVTTW-LAISNSFCNCVIYSLSNSVFRLGMRRLSQTLCSSCSFSPCTHD 352

  Fly   346 DQLPADSKHRMEATSSS 362
            |:...:.|.|..|.|.|
Zfish   353 DKDFGEPKPRKRANSCS 369

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 82/297 (28%)
7tm_1 67..321 CDD:278431 71/277 (26%)
gpr52XP_021325264.1 7tm_classA_rhodopsin-like 45..326 CDD:320086 79/295 (27%)
TM helix 1 45..70 CDD:320086 10/25 (40%)
TM helix 2 78..104 CDD:320086 8/25 (32%)
TM helix 3 116..146 CDD:320086 11/29 (38%)
TM helix 4 159..178 CDD:320086 5/19 (26%)
TM helix 5 202..227 CDD:320086 3/31 (10%)
TM helix 6 252..293 CDD:320086 12/40 (30%)
TM helix 7 301..326 CDD:320086 11/25 (44%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24249
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
22.010

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