DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and LOC100489755

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_002939180.1 Gene:LOC100489755 / 100489755 -ID:- Length:346 Species:Xenopus tropicalis


Alignment Length:361 Identity:72/361 - (19%)
Similarity:130/361 - (36%) Gaps:98/361 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    53 WLAINAFLFVLILGGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCVG-LALPYHLVFYMGSDI 116
            ::.:...|.:.|:..|:|....|...:.||:| :|..|:|||.:|..|| :|:|:.:|..|...:
 Frog     7 FIFLEIILALSIVSMNVLVCATVYLHKELRTV-TNFLIVSLAAADIGVGAVAIPFSIVLSMEYTL 70

  Fly   117 GAMRGPCLLRFFLLICACCV----SMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCL 177
                  |......:.|...|    |:|.|:.||::.::.:.....|..::|....:..::....|
 Frog    71 ------CFYTCIFITCFPLVTTQFSILLLLLIAINAHLKIRLPNSYSLHVTNVRVFLAVVLCLLL 129

  Fly   178 GALVALLPVF-WNRWPD------------------------------------------------ 193
            ..|:||.|:. ||::..                                                
 Frog   130 SCLIALSPMMGWNQFQQYVNGNRSLQNLASERSMVGYPRPSPVIDLSGAYFSHKEADNNSGIQGE 194

  Fly   194 -AQACEFDEVLAPGYIAGVITPGFVII-WICMFLVYWRIMREASKQALRLRQSVVYNTDEATTMR 256
             ...|....|.:|.|:...:..|..:: ...|..:|..|.|.|..   .||.:..:....|.|: 
 Frog   195 HLGCCSLTAVFSPEYLVYFVFFGCTLLPLFIMLAIYGNIFRVARS---HLRSAKRWEAHMACTL- 255

  Fly   257 NLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQSSSM---IYKTTFSLAIANSALNP 318
                          :.::|.|.|||:|...:...:|  :|.|.|:   :.......:..||..||
 Frog   256 --------------LLLVGMFCLCWIPLNVINSLRL--LCWSCSIPVNLIHVAVIFSHMNSFANP 304

  Fly   319 IIYSWKNSGF----RRAFVQTL--------CCRTAR 342
            ::|:.:...|    |...:..|        |||..:
 Frog   305 LVYAMRKKDFGGALRSVCLDLLTCWSPVKACCRKTK 340

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 67/333 (20%)
7tm_1 67..321 CDD:278431 63/312 (20%)
LOC100489755XP_002939180.1 7tm_GPCRs 5..314 CDD:391938 66/333 (20%)
TM helix 1 7..31 CDD:341315 5/23 (22%)
TM helix 2 40..62 CDD:341315 10/21 (48%)
TM helix 3 76..98 CDD:341315 6/21 (29%)
TM helix 4 121..137 CDD:341315 4/15 (27%)
TM helix 5 208..231 CDD:341315 3/22 (14%)
TM helix 6 249..274 CDD:341315 8/39 (21%)
TM helix 7 286..311 CDD:341315 5/24 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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