DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and taar19b

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_021335134.1 Gene:taar19b / 100333348 ZFINID:ZDB-GENE-091116-74 Length:334 Species:Danio rerio


Alignment Length:311 Identity:77/311 - (24%)
Similarity:142/311 - (45%) Gaps:43/311 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 GHLLWLAINAFLFVLILGGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGL-ALPYHLV--- 109
            |::::|.: :||....:..|:|.|:::...:.|.:. :|:.:|||||:|..:|| .:|...|   
Zfish    30 GYIIYLFV-SFLSAWTVFLNLLVIISISHFKKLHTP-TNMIVLSLAVADLLIGLIVMPVEAVKLI 92

  Fly   110 ---FYMGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSII 171
               :|.|...      |.....|:......|:..|:.||||||.||.:.|.|.:.:|.......|
Zfish    93 ETCWYFGDTF------CGFTLILIGVIPSASLGNLVLIAVDRYAAVCHPLLYPQKITMANMLMSI 151

  Fly   172 IFNWCLGALVALLPVFWNRWPD----AQACEFDEVLAPGYIAGVITPGFV-IIWICMFLV--YWR 229
            ..:|...:......|.:||:.|    ...| :.:.|.....:.::|..|| .::.|:.::  |.|
Zfish   152 CLSWVYYSTYITTLVIYNRYFDTSHRTDEC-YGQCLVMMSFSWILTDLFVCFVFPCVLIITLYLR 215

  Fly   230 IMREASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFS 294
            |.....:| :::..|:: ...:..|..::....:.|:...:..|:..:.|||:||:         
Zfish   216 IFYVVHQQ-VKVINSLM-KGGKCVTEGSVKRKSESKAALTLGIIVSVYLLCWIPYY--------- 269

  Fly   295 IC----QSSSMIYKTTFSLAIANSALNPIIYS----WKNSGFRRAFVQTLC 337
            ||    .||:::...|:.| .|||.|||::|:    |.....:.....|:|
Zfish   270 ICTLTVNSSTVLSVLTWVL-YANSGLNPLVYALFYPWFKKTVKHILTMTIC 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 71/292 (24%)
7tm_1 67..321 CDD:278431 69/271 (25%)
taar19bXP_021335134.1 7tmA_TAARs 32..310 CDD:320183 74/298 (25%)
TM helix 1 32..58 CDD:320183 6/26 (23%)
TM helix 2 65..91 CDD:320183 11/25 (44%)
TM helix 3 103..133 CDD:320183 11/29 (38%)
TM helix 4 145..168 CDD:320183 3/22 (14%)
TM helix 5 190..219 CDD:320183 7/28 (25%)
TM helix 6 245..275 CDD:320183 9/38 (24%)
TM helix 7 278..303 CDD:320183 10/25 (40%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24249
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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