DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and taar19e

DIOPT Version :10

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_009303914.4 Gene:taar19e / 100147984 ZFINID:ZDB-GENE-091116-66 Length:353 Species:Danio rerio


Alignment Length:299 Identity:77/299 - (25%)
Similarity:126/299 - (42%) Gaps:67/299 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 FLFVLILGG-----NILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGL-ALPYHLV------FY 111
            ::|..:|..     |:|.|:::...:.|.:. :|:.||||||:|..:|| .:|...|      :|
Zfish    53 YVFFSLLSAWTVFLNLLVIISISHFKKLHTP-TNMIILSLAVNDLLIGLFVMPVEAVRLIDKCWY 116

  Fly   112 MGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWC 176
            .|...      |.....|:......|:..|:.||||||.||.|.|.|.:.::.......|..:|.
Zfish   117 FGDTF------CGFTLILIGVIPSASLSNLVLIAVDRYAAVCYPLLYPQKISMTNTLMSICLSWV 175

  Fly   177 --LGALVALLPVFWNRWPD----AQACEFDEVLAPGYIAGVITPGFV-IIWIC--MFLVYWRI-- 230
              ...:.||  |.:||:.|    ...| :.|.......:.:||..|: .|:.|  |..:|.||  
Zfish   176 YYFAYITAL--VIYNRYLDTSHRTDEC-YGECTIMMSFSWIITDLFMCFIFPCTIMITLYLRIFY 237

  Fly   231 --------MREASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCV 287
                    |....|....:.:.:|....|:            |:...:..|:..:.|||:||:  
Zfish   238 VVHQQVKVMNSLMKGGKCVTEGLVKRKSES------------KAALTLGIIVSVYLLCWIPYY-- 288

  Fly   288 AIAQLFSICQSSSMIYKTTFSLAI----ANSALNPIIYS 322
                   || |.::|..|..::.|    |||.:||::|:
Zfish   289 -------IC-SLTVISSTAINVLIWAVFANSGVNPLVYA 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 77/299 (26%)
TM helix 1 53..78 CDD:410626 5/23 (22%)
TM helix 2 86..111 CDD:410626 12/31 (39%)
TM helix 3 123..153 CDD:410626 11/29 (38%)
TM helix 4 166..185 CDD:410626 4/20 (20%)
TM helix 5 204..229 CDD:410626 7/27 (26%)
TM helix 6 261..291 CDD:410626 7/29 (24%)
TM helix 7 300..325 CDD:410626 9/27 (33%)
taar19eXP_009303914.4 None

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