DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and adrb2b

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001082940.2 Gene:adrb2b / 100037315 ZFINID:ZDB-GENE-070410-32 Length:409 Species:Danio rerio


Alignment Length:395 Identity:109/395 - (27%)
Similarity:180/395 - (45%) Gaps:83/395 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SSPEALGVVPFLWQHQNATETPTEITLQATSFGAGHLLWLAINAFLFVLILGGNILTIVAVRTCR 79
            |||.:|.|..:         :..|:.|.:...|           .|.::|:.||.|.|.|:...:
Zfish    25 SSPVSLSVSEY---------SDAEVVLISILIG-----------ILVLVIVFGNALVISAIVRFQ 69

  Fly    80 HLRSVISNLFILSLAVSDFCVGL-ALPYHLVFYMGSDIGAMRGPCLL------------RFFLLI 131
            .|::| :|.||.|||.:|..:|| .:|:              |.|.:            .|:...
Zfish    70 RLQTV-TNYFISSLACADLVMGLMVVPF--------------GACYILLNTWHFGNFFCEFWTAT 119

  Fly   132 CACCV--SMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCLGALVALLPVFWNRW--- 191
            ...||  |:.||..||:|||||:::.|.|:..:|:|.|..::|..|.:.||::.||:....|   
Zfish   120 DVLCVTASIETLCVIALDRYIAIMWPLRYQSMLTKRKACGMVIGVWAVAALISFLPIHMEWWVSD 184

  Fly   192 -PDA-------QACEFDEVLAPGYIAGVITPGFVIIWICMFLVYWRIMREASKQALRL------- 241
             |:|       ..|:|:...|....:.:|:  |.|..:.|..||.|:.:||.:|..::       
Zfish   185 EPEALSCLEEPTCCDFNTNAAYAVTSSIIS--FYIPLVIMAFVYSRVFQEARRQLQKIDRIEGRI 247

  Fly   242 -RQSVVYNTDEATTMRN---LLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQSSSMI 302
             .||:  :|.|...::|   .....|.|:::.:..|||.|||||||:|.:.:........:..:.
Zfish   248 RTQSL--STQEGNEIKNRRTKFCMKDHKALKTLGIIMGTFTLCWLPFFVLNVVAAIWKMDNIMLP 310

  Fly   303 YKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLCCRTARQCEDQLPAD-SKHRMEATSSSQEIK 366
            ::....:..||||.||:||. ::..||.||.:.||.|.:     .||:. ||.....:..|.::.
Zfish   311 FRILNWIGYANSAFNPLIYC-RSPEFRCAFQEILCWRPS-----HLPSTRSKKGYLYSGHSWKVH 369

  Fly   367 PKATQ 371
            .|.|:
Zfish   370 TKTTR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 88/307 (29%)
7tm_1 67..321 CDD:278431 83/290 (29%)
adrb2bNP_001082940.2 7tm_GPCRs 41..339 CDD:333717 91/328 (28%)
TM helix 1 43..67 CDD:320095 8/34 (24%)
TM helix 2 76..98 CDD:320095 10/35 (29%)
TM helix 3 114..136 CDD:320095 7/21 (33%)
TM helix 4 159..175 CDD:320095 4/15 (27%)
TM helix 5 204..227 CDD:320095 6/24 (25%)
TM helix 6 272..297 CDD:320095 12/24 (50%)
TM helix 7 308..333 CDD:320095 8/25 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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