DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-C and adrb2b

DIOPT Version :10

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:NP_001082940.3 Gene:adrb2b / 100037315 ZFINID:ZDB-GENE-070410-32 Length:409 Species:Danio rerio


Alignment Length:395 Identity:109/395 - (27%)
Similarity:180/395 - (45%) Gaps:83/395 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 SSPEALGVVPFLWQHQNATETPTEITLQATSFGAGHLLWLAINAFLFVLILGGNILTIVAVRTCR 79
            |||.:|.|..:         :..|:.|.:...|           .|.::|:.||.|.|.|:...:
Zfish    25 SSPVSLSVSEY---------SDAEVVLISILIG-----------ILVLVIVFGNALVISAIVRFQ 69

  Fly    80 HLRSVISNLFILSLAVSDFCVGL-ALPYHLVFYMGSDIGAMRGPCLL------------RFFLLI 131
            .|::| :|.||.|||.:|..:|| .:|:              |.|.:            .|:...
Zfish    70 RLQTV-TNYFISSLACADLVMGLMVVPF--------------GACYILLNTWHFGNFFCEFWTAT 119

  Fly   132 CACCV--SMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWCLGALVALLPVFWNRW--- 191
            ...||  |:.||..||:|||||:::.|.|:..:|:|.|..::|..|.:.||::.||:....|   
Zfish   120 DVLCVTASIETLCVIALDRYIAIMWPLRYQSMLTKRKACGMVIGVWAVAALISFLPIHMEWWVSD 184

  Fly   192 -PDA-------QACEFDEVLAPGYIAGVITPGFVIIWICMFLVYWRIMREASKQALRL------- 241
             |:|       ..|:|:...|....:.:|:  |.|..:.|..||.|:.:||.:|..::       
Zfish   185 EPEALSCLEEPTCCDFNTNAAYAVTSSIIS--FYIPLVIMAFVYSRVFQEARRQLQKIDRIEGRI 247

  Fly   242 -RQSVVYNTDEATTMRN---LLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQSSSMI 302
             .||:  :|.|...::|   .....|.|:::.:..|||.|||||||:|.:.:........:..:.
Zfish   248 RTQSL--STQEGNEIKNRRTKFCMKDHKALKTLGIIMGTFTLCWLPFFVLNVVAAIWKMDNIMLP 310

  Fly   303 YKTTFSLAIANSALNPIIYSWKNSGFRRAFVQTLCCRTARQCEDQLPAD-SKHRMEATSSSQEIK 366
            ::....:..||||.||:||. ::..||.||.:.||.|.:     .||:. ||.....:..|.::.
Zfish   311 FRILNWIGYANSAFNPLIYC-RSPEFRCAFQEILCWRPS-----HLPSTRSKKGYLYSGHSWKVH 369

  Fly   367 PKATQ 371
            .|.|:
Zfish   370 TKTTR 374

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_classA_rhodopsin-like 53..325 CDD:410626 87/308 (28%)
TM helix 1 53..78 CDD:410626 7/24 (29%)
TM helix 2 86..111 CDD:410626 10/25 (40%)
TM helix 3 123..153 CDD:410626 14/43 (33%)
TM helix 4 166..185 CDD:410626 5/18 (28%)
TM helix 5 204..229 CDD:410626 7/24 (29%)
TM helix 6 261..291 CDD:410626 13/29 (45%)
TM helix 7 300..325 CDD:410626 8/24 (33%)
adrb2bNP_001082940.3 None

Return to query results.
Submit another query.