DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and LOC100007535

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_001345968.4 Gene:LOC100007535 / 100007535 -ID:- Length:312 Species:Danio rerio


Alignment Length:328 Identity:90/328 - (27%)
Similarity:152/328 - (46%) Gaps:55/328 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    52 LWLAINAFLFVLILGGNILTIVAVRTCRHLRSVISNLFILSLAVSDFCVG-LALPYHLVFYMGSD 115
            |::.:...:.:..:.||::.:.|||..|.||.. :..||:|||::|..|| |.:|..:...:|..
Zfish     7 LYIGMELLIALFSVIGNVMVVWAVRINRTLRDT-TIYFIVSLALADIAVGALVIPLAITISIGLK 70

  Fly   116 IGAMRGPCLLRFFLLICACCV------SMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFN 174
            ...        :..|:.||.|      |:|.|::||:|||:.|...:.|:|.:|...|.:.::..
Zfish    71 TNF--------YSCLLVACTVLVLTQSSILALLAIAIDRYLRVKIPMSYKRVVTPNRAGAAVVVC 127

  Fly   175 WCLGALVALLPVF-WNRWPDAQ------------ACEFDEVLAPGYIA-----GVITPGFVIIWI 221
            |.:..:|.|:|:. ||.....|            .|||:.|::..|:.     |.:.|..::   
Zfish   128 WMVAIVVGLMPMLGWNNLDKLQQTNGTVGVDLLITCEFENVISMEYMVYFNFFGWVLPPLIL--- 189

  Fly   222 CMFLVYWRIMREASKQALRLRQSVVYNTDEATTM--RNLLLHPDWKSVQIVVFIMGCFTLCWLPY 284
             |.|:|..|.....||   |.:.|:.|..:.|..  :.|.|.   ||:.:|:.:   |.:.|||.
Zfish   190 -MLLIYIEIFFIIHKQ---LNKKVITNQTDPTRYYGKELKLA---KSLALVLLL---FAVSWLPL 244

  Fly   285 FCVAIAQLF-SICQSSSMIYKTTFSLAIANSALNPIIYSWKNSGFRRAFV----QTLCCRTARQC 344
            ..:....|| ..|.:|..:......|:..||.:|||:|:::...|:.||:    |.:|| |...|
Zfish   245 HILNCITLFCPNCDNSMCLLYVAILLSHGNSVVNPIVYAFRIKKFQNAFLRIWKQYVCC-TDSPC 308

  Fly   345 EDQ 347
            ..|
Zfish   309 LSQ 311

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 81/298 (27%)
7tm_1 67..321 CDD:278431 79/281 (28%)
LOC100007535XP_001345968.4 7tm_GPCRs 7..293 CDD:333717 82/307 (27%)
TM helix 1 8..32 CDD:320095 4/23 (17%)
TM helix 2 41..63 CDD:320095 10/21 (48%)
TM helix 3 77..99 CDD:320095 8/21 (38%)
TM helix 4 122..138 CDD:320095 3/15 (20%)
TM helix 5 172..195 CDD:320095 5/26 (19%)
TM helix 6 224..249 CDD:320095 9/30 (30%)
TM helix 7 261..286 CDD:320095 7/24 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.920

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