DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment mAChR-C and taar19o

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_009303913.2 Gene:taar19o / 100003319 ZFINID:ZDB-GENE-060414-13 Length:356 Species:Danio rerio


Alignment Length:288 Identity:69/288 - (23%)
Similarity:123/288 - (42%) Gaps:45/288 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 FLFVLILGG-----NILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGL-ALPYHLV------FY 111
            ::|..:|..     |:|.|:::...:.|.:. :|:.||||||:|..:|| .:|...:      :|
Zfish    53 YVFFSLLSAWTVFLNLLVIISISHFKKLHTP-TNMIILSLAVADLLIGLIVMPIQAIRLIETCWY 116

  Fly   112 MGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNWC 176
            .|...      |.|...::......::..|:.||||||:||.:.|.|.:.:|.......|...|.
Zfish   117 FGDTF------CGLSLIIISVIFSATLSCLVLIAVDRYVAVCHPLLYPQKITMAKMLMSICLCWL 175

  Fly   177 LGALVALLPVFWNRWPD----AQAC--EFDEVLAPGYIAGVITPGFVIIWICMFLVYWRIMREAS 235
            ..:......|..|.:.|    ...|  |...:|:..:|...:...|:...:.|..:|.||.....
Zfish   176 YYSAYNTALVIDNGYFDTSYRTDMCYGECSVMLSFSWILTDMFMSFIFPCLIMITLYLRIFYVVH 240

  Fly   236 KQALRLRQSVVYN---TDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIAQLFSICQ 297
            :| :::..|::..   ..|.:..|.    .:.|:...:..|:..:.|||:||:         ||.
Zfish   241 QQ-VKVINSLMKGGKCVMEGSVKRK----SESKAALTLGIIVLVYLLCWIPYY---------ICS 291

  Fly   298 SSSMIYKTTFSLA---IANSALNPIIYS 322
            .:...:.|...|:   .|||.|||::|:
Zfish   292 LTVNSFTTITVLSWTVYANSGLNPLVYA 319

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 69/286 (24%)
7tm_1 67..321 CDD:278431 66/277 (24%)
taar19oXP_009303913.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24249
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.