DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and LOC100002481

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_009303904.3 Gene:LOC100002481 / 100002481 -ID:- Length:324 Species:Danio rerio


Alignment Length:318 Identity:83/318 - (26%)
Similarity:138/318 - (43%) Gaps:64/318 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 FLFVLILGG-----NILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGLALPYHLV------FYM 112
            ::||.:|..     |:|.|:::...:.|.:. :|:.||||||:|..:||.:|...:      :|.
Zfish    35 YVFVSLLSAWTVFLNLLVIISISHFKKLHTP-TNMIILSLAVNDLFIGLVMPVEAIRLTETCWYF 98

  Fly   113 GSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFNW-C 176
            | ||.     |.|....:......|:..|:.|:||||:||.:.|.|...:|.......|..|| |
Zfish    99 G-DIF-----CALYILFISFLVSASLSNLVLISVDRYVAVCHPLQYPLKITITKTLMSICLNWVC 157

  Fly   177 LGALVALLPV---FWNRWPDAQACEFDEVLAPGYIAGVITPGFV-IIWICMFLV--YWRI----- 230
            ..|.:....:   :::.......| :.:.|.....:.::|..|| .|:.|:.::  |.||     
Zfish   158 FSAYIIAFVINNGYFDSLHRTDVC-YGQCLVMMSFSWIVTDLFVSFIFPCVLIISLYLRIFYVVH 221

  Fly   231 -----MREASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCVAIA 290
                 :....|...|:.:|.|....|:            |:...:..|:..:.|||:|| |    
Zfish   222 QQVKVINSLMKGGKRVMKSSVKRKSES------------KAALTLGIIVSVYMLCWIPY-C---- 269

  Fly   291 QLFSICQSSSMIYKTTFS----LAIANSALNPIIYSWKNSGFRRA--FVQTLCCRTAR 342
                || |.::|..||.:    |..|||.|||::|:.....|::.  .:.||...|.|
Zfish   270 ----IC-SLTVISSTTINVLLLLVYANSGLNPLVYALFYPWFKKTAKLILTLKIFTLR 322

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 79/304 (26%)
7tm_1 67..321 CDD:278431 74/285 (26%)
LOC100002481XP_009303904.3 7tmA_TAARs 32..309 CDD:320183 79/303 (26%)
TM helix 1 33..59 CDD:320183 6/23 (26%)
TM helix 2 66..91 CDD:320183 11/24 (46%)
TM helix 3 103..133 CDD:320183 10/29 (34%)
TM helix 4 145..168 CDD:320183 5/22 (23%)
TM helix 5 190..219 CDD:320183 8/28 (29%)
TM helix 6 245..275 CDD:320183 12/51 (24%)
TM helix 7 278..303 CDD:320183 10/24 (42%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D252862at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.010

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