DRSC/TRiP Functional Genomics Resources

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Protein Alignment mAChR-C and taar20c1

DIOPT Version :9

Sequence 1:NP_572358.1 Gene:mAChR-C / 31626 FlyBaseID:FBgn0029909 Length:371 Species:Drosophila melanogaster
Sequence 2:XP_009303901.2 Gene:taar20c1 / 100001919 ZFINID:ZDB-GENE-091116-60 Length:351 Species:Danio rerio


Alignment Length:295 Identity:71/295 - (24%)
Similarity:128/295 - (43%) Gaps:54/295 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    56 INAFLFVLILGG-----NILTIVAVRTCRHLRSVISNLFILSLAVSDFCVGLALPYHLV------ 109
            |..::||.:|..     |:|.|:::...:.|.:. :|:.||||||:|..|||.:|...:      
Zfish    50 IITYVFVSLLSAWTVFLNLLVIISISHFKKLHTP-TNMIILSLAVNDLLVGLVMPIEAIRLIETC 113

  Fly   110 FYMGSDIGAMRGPCLLRFFLLICACCVSMLTLISIAVDRYIAVVYALHYRRYMTRRVAYSIIIFN 174
            :|.|.....:    .|.|..|:.|..:..|.|  ||||||:||.:.|.|.:.:|.......|..:
Zfish   114 WYFGDTFCGL----YLLFVSLLLATSIGNLVL--IAVDRYVAVCHPLLYPQKITITKTLMSICLS 172

  Fly   175 WCLGALVALLPVFWNRWPDA----QACEFDEVLAPGYIAGVITPGFV-IIWIC--MFLVYWRI-- 230
            |...:...:..:..|.:.|.    ..| :.|.|.....:..:|..|: .|:.|  :.::|.||  
Zfish   173 WACSSAYIIAILINNSYFDTSHRKDKC-YGECLLMITFSWFVTDLFMSFIFPCTLIMMLYLRIFY 236

  Fly   231 --------MREASKQALRLRQSVVYNTDEATTMRNLLLHPDWKSVQIVVFIMGCFTLCWLPYFCV 287
                    :....|....|::..|....|:            |:...:..|:..:.||::|| |:
Zfish   237 VVHQQVKVINSLMKHGKCLKEGSVKRKSES------------KAALTLGIIVSVYLLCYIPY-CI 288

  Fly   288 AIAQLFSICQSSSMIYKTTFSLAIANSALNPIIYS 322
            ....:.|:...:.:|:     :..:||.:||::|:
Zfish   289 CSLTVNSVTAMNVLIW-----IVYSNSGVNPLVYA 318

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
mAChR-CNP_572358.1 7tm_4 61..332 CDD:304433 70/290 (24%)
7tm_1 67..321 CDD:278431 66/281 (23%)
taar20c1XP_009303901.2 None


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR24249
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

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