Sequence 1: | NP_001284967.1 | Gene: | nonC / 31625 | FlyBaseID: | FBgn0263968 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_008835.5 | Gene: | PRKDC / 5591 | HGNCID: | 9413 | Length: | 4128 | Species: | Homo sapiens |
Alignment Length: | 2182 | Identity: | 406/2182 - (18%) |
---|---|---|---|
Similarity: | 738/2182 - (33%) | Gaps: | 669/2182 - (30%) |
- Green bases have known domain annotations that are detailed below.
Fly 381 GMPTCECIVKMAVDHLIKIMPTLHL----------NTEALVNINELICICL-------LNNFTGL 428
Fly 429 DPILLEQVLLDQVKRMISLTELQRQSVLYLLLCTVRRLRARLTPSLVHFIFQSNPY-------MT 486
Fly 487 KVRLRSPGETSYK---LLLRTCQETLLIRNVPL-------LQQAYKYLVDDIDACLEKLLITAPR 541
Fly 542 SKARKASVLLVFHLSALAALAKQTSSIIGMYACKPSILELLLTNCRAH---ELKFWSKYPAAQQA 603
Fly 604 IFGLLVVHCQANHNFRTNSSLLRDQELSAENTSPTANSFASILRF---------LDSVLGQAHQL 659
Fly 660 APQNLRVLL----QWIQMLLRECREKI-DLLM-EQENFRGICRNIAATASKLVPLESAACIQTVL 718
Fly 719 DYGLERLEKYPKLLILYRD----------TALQQLQMLSTNYHAPYFQIY-----AQLPLHLTLT 768
Fly 769 GGESSMPGMASRRVSVWQQRISQYS-----AVRDNVFRDFFDRVQKPEQDSLIHCLRE--LFVR- 825
Fly 826 --SCQV-APQDERQMNLSQCTKRCQRLAIAWLQFEAARYCVDQRLRTTVGKPQETFLGFEAIIMR 887
Fly 888 HARLLSGCAKEIERSALD------------------DLSLEELLSMQSNLSLLLGFLDALEKL-I 933
Fly 934 YNAAEGSAFALRPPEKQVAAFFRLNNPTCQSWFNRIRIGVVIIAMHVQQPELVIRYAQQI--LVN 996
Fly 997 SKTQDPTYSQAIVYMAWSLVSCQEADSLRGLRLWARGKSCKSYKWLKYAADQAAGKRESALAGYR 1061
Fly 1062 TILAEKELQSELEPHTRQFV------VSQMMQCLQDLG-QWSQL--------------------- 1098
Fly 1099 VELKQQQMTR--PEDRELNPFLQRSNVEVNALERL-LAKSEESCSSMDALGGVFQQLSLWPSNWD 1160
Fly 1161 ESVSSSGLSERASFSSIHMRQRTEDIVLHKLLEDRCVP----DQAKNLLDTQWRDSLLNPSFDQR 1221
Fly 1222 SCKELTLL---RHIVQGVSGGQELSLLPVSSGRCQNRSKFISSAILMRCL------AWTQLLRQH 1277
Fly 1278 CAPGSWETLCLDAAAAAREEGNLQLAETLLTQFFGQPIGEIAALFSLEQGV-------QTDNPEM 1335
Fly 1336 LRGYSELVKCLH------LQQQQSQTH----------SGDLSSSIDVCAALCLNIQKSNNQPAAG 1384
Fly 1385 ADLLLNLADWIAVRTCNGLTTNQSPVLIQLLDQLPE-----CPLTCDSSQPLAIPQAERMVARLV 1444
Fly 1445 HSC-----------LQQRPNYAEAL----------IAYGNWCYRWGKKVADSCC----------- 1477
Fly 1478 ----VLTQADATAISQALDIPQPLESEKL---DE----------LLQALSTEQPPANCVEVCPDA 1525
Fly 1526 ARARDDEAAKNRLRRLTFLADKTPEALDAILQIWRRAIANTYDYYKDAARSYFQYLSFKSGSGPE 1590
Fly 1591 KPE--------GEGVV---------------SQRERLHVDDS-------NLVTTTL--------- 1616
Fly 1617 -------RLLRLIVKHASGLQEVLEQGLHTTPIAPWKVI--IPQLFSRLNHHEPY-VRKSVCDLL 1671
Fly 1672 CRLAKSRPQLVIFPAVVGANREQQDATAPPATARPTTEDACCYGYLLGELSKQAPEAVQHVKLMV 1736
Fly 1737 KELRRVCLLWDEYWIHSLAHIYNTYVSRVSALATDFRPDDHEGKNNRFNVWRPQLLADLEALVAV 1801
Fly 1802 TSRPPETTYER--------------SFRKRFDAPIRLTVDALRHRRYPEAWDKL--------KQL 1844
Fly 1845 YHILQSNMIRGSGSTLKMQSISPVLCGIG----RMRISMPG-LDAHG---PDGDQVYIESVESSV 1901
Fly 1902 CVLPTKTKPKKVAFYGSNGQRYTFLFKGMEDLHLDERIMQFLSISNAIMACRSDAPGNGCYRAHH 1966
Fly 1967 YSVIPLGPQSGLISWVDGVTPVFAL-----------------------YKKWQQRRSQVAGNAGA 2008
Fly 2009 GAVANVPRRFTDLFYNKLSPLLAKHNMQVSDPRRQWPISVLLQVLDELSQETPNDLLARELWCQA 2073
Fly 2074 GNAAEWRQSVR-RFVRCMSVMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKG-RTLRI 2136
Fly 2137 PEKVPFRLTQ---NLVQAMGITGIEGPFRLGCEYVLKVMRKERETLLTLLEAFVYDPLVDWTTND 2198
Fly 2199 DAQALRRSLNAKLQESADGGGAGGLGVGDLKYHKKDK 2235 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nonC | NP_001284967.1 | SMG1 | 571..1140 | CDD:292413 | 109/664 (16%) |
Rapamycin_bind | 1738..1845 | CDD:285924 | 21/128 (16%) | ||
PIKKc_SMG1 | 1894..2196 | CDD:270714 | 80/329 (24%) | ||
FATC | 3189..3217 | CDD:280430 | |||
PRKDC | NP_008835.5 | HEAT 1 | 288..323 | ||
HEAT 2 | 1004..1040 | ||||
Interaction with C1D. /evidence=ECO:0000269|PubMed:9679063 | 1503..1538 | ||||
Leucine-zipper | 1503..1538 | ||||
TPR 1 | 1723..1756 | ||||
NUC194 | 1816..2202 | CDD:400469 | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2050..2073 | ||||
KIP-binding | 2436..3212 | 169/900 (19%) | |||
FAT | 3023..3470 | CDD:396714 | 96/497 (19%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 3200..3222 | 5/21 (24%) | |||
PIKKc_DNA-PK | 3719..4015 | CDD:270716 | 80/330 (24%) | ||
FATC | 4097..4128 | CDD:396715 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5032 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D26975at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
User_Submission | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |