DRSC/TRiP Functional Genomics Resources

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Protein Alignment nonC and pik3c3

DIOPT Version :9

Sequence 1:NP_001284967.1 Gene:nonC / 31625 FlyBaseID:FBgn0263968 Length:3218 Species:Drosophila melanogaster
Sequence 2:XP_021333200.1 Gene:pik3c3 / 548346 ZFINID:ZDB-GENE-050410-13 Length:887 Species:Danio rerio


Alignment Length:478 Identity:94/478 - (19%)
Similarity:171/478 - (35%) Gaps:175/478 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly  1839 DKLKQLYHILQSNMIRGSGS----TLKMQSISPVLCGIGRMRISMPGLDAHGPDGDQVYIESVE- 1898
            |:|.||...:|    |.||:    |.::||:.                    .|.::|.:..:| 
Zfish   550 DRLVQLMKAVQ----RESGNRKKKTERLQSLL--------------------ADNEKVNLSEIEP 590

  Fly  1899 ----------------SSVCVLPTKTKPKKVAFYGSNGQRYTFLFKGMEDLHLDERIMQFLSISN 1947
                            .:..:..:...|.|:.|...:|::|..:||..:||..|:.|:|.:|:.:
Zfish   591 IPLPLEPQIRIKGIIPETATLFKSALMPAKLIFKTEDGEQYPVIFKHGDDLRQDQLILQIISLMD 655

  Fly  1948 AIMACRSDAPGNGCYRAHHYSVIPLGPQSGLISWVDGVTPVFALYKKWQQRRSQVAGNAGAGAVA 2012
            .::  |.:   |...:...|.|:....:.|.:.:|..| ||           ::|....|     
Zfish   656 KLL--RKE---NLDLKLTPYKVLATSTKHGFMQFVQSV-PV-----------AEVLATEG----- 698

  Fly  2013 NVPRRFTDLFYNKLSPLLAKHNMQVSDPRRQWPISVLLQVLDELSQETPNDLLARELWCQAGNAA 2077
            |:     ..|:.|.:            |..:.|..:..:|:|                       
Zfish   699 NI-----QSFFRKYA------------PNDKGPYGISSEVMD----------------------- 723

  Fly  2078 EWRQSVRRFVRCMSVMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKGRTLRIPEKVPF 2142
                   .:|:..:...:|.|::|:|||||||:|:. .:|.:.|||:.  :..||..: |...|.
Zfish   724 -------TYVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLFHIDFG--YILGRDPK-PLPPPM 777

  Fly  2143 RLTQNLVQAMGITGIEG----PFRLGCEYVLKVMRKERETLLTLLEAFVYDPLVDWTTNDDAQAL 2203
            :|::.:|:.||  |::.    .||..|......:|:....:|.|....|...:.|.....|    
Zfish   778 KLSKEMVEGMG--GMQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMVDANIPDIALEPD---- 836

  Fly  2204 RRSLNAKLQESADGGGAGGLGVGDLKYHKKDKNKGKPLD-SDVKRQPFLSKLGMLQKYWSTNKTE 2267
                                     |..||.::|.: || ||.:...::..|             
Zfish   837 -------------------------KTVKKVQDKFR-LDLSDEEAVHYMQSL------------- 862

  Fly  2268 LMPQLEEMEQEVGNLQAAQAKQV 2290
                   :::.||.|.||..:|:
Zfish   863 -------IDESVGALFAAVVEQI 878

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonCNP_001284967.1 SMG1 571..1140 CDD:292413
Rapamycin_bind 1738..1845 CDD:285924 3/5 (60%)
PIKKc_SMG1 1894..2196 CDD:270714 65/322 (20%)
FATC 3189..3217 CDD:280430
pik3c3XP_021333200.1 C2_PI3K_class_III 25..194 CDD:176042
PI3Ka_III 291..503 CDD:238442
PI3Kc_III 539..883 CDD:270628 94/478 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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