DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment nonC and mei-41

DIOPT Version :9

Sequence 1:NP_001284967.1 Gene:nonC / 31625 FlyBaseID:FBgn0263968 Length:3218 Species:Drosophila melanogaster
Sequence 2:NP_523369.2 Gene:mei-41 / 32608 FlyBaseID:FBgn0004367 Length:2517 Species:Drosophila melanogaster


Alignment Length:2350 Identity:440/2350 - (18%)
Similarity:772/2350 - (32%) Gaps:855/2350 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   136 RRLINENNPTVSLELCSK----------------LDQAVRTPINMGYMTCSFVWILDNMLTLYKQ 184
            |.|:.:.....:.|:|:.                ||..||..:|        |::||.:..... 
  Fly   755 RSLVAQEAVLAATEMCASQGLQTIHLWNWYKRDALDLTVRLALN--------VYLLDGVRFTRS- 810

  Fly   185 CPPPVLEECSKTLGLIGFINRKSYPIYEEFIVKNYK----------------------SSKRMQK 227
                 |...:|.||         :...:||..|.::                      .:|:|||
  Fly   811 -----LRALTKMLG---------FTCVQEFTCKYHRLLTAMVLPHCIVNPLCKGVLVLIAKQMQK 861

  Fly   228 YMIMALRATLSCDTKCELHMYA-------------DKIMLLLKDFLENAESADIFIVVSNTLVQF 279
            ::     .||...:...::.:.             :.::...:..|:...:||:...|:..|:.|
  Fly   862 HI-----GTLFSISFLRIYTHVFLTEEPELANSCIELVVSCTQSSLQQLMNADVKQTVAELLIYF 921

  Fly   280 AASYAETFECH-FTDVVDIVIGWQLEAGQPTDLKTHCAQVLEQLTPFFSKQIDFSYGLLDQFVED 343
            ..:  .||... |..::      ||..|...:|.:..|..            :|:..:.::|:..
  Fly   922 NRN--PTFVMRSFQSLL------QLSIGSLEELSSQTANA------------EFANFIAERFLGV 966

  Fly   344 ITTLEE--GEPA-------NTAERVG---AFVGA----------------FNTLLK------CLA 374
            ||..|.  .||:       .|...:|   .|||:                .:||.:      ||.
  Fly   967 ITYFESCLSEPSFEKPLKEETLYSLGQIMRFVGSQHVTQFRFKIIAMLSFVHTLQEPRLQRICLK 1031

  Fly   375 RMQIFVGMPTCECIVKMAVDHLIKIMPTLHLNTEALVNINELICICLLNNFTGLDPILLEQVLLD 439
            ...||:.:...: .:..::..::..:..|..:.|::..:|:|....:|.|.:.|...:.:...||
  Fly  1032 IWHIFLHVVNVQ-ELGPSLGRIVATLQPLLADNESVKQVNDLYEFIILRNASMLGTFITDLYFLD 1095

  Fly   440 QVKRMISLTELQRQSVLYLLLCTVRRLRARL-TPSLVHFIFQSNPYMTKVRLRSPGETSYKLLLR 503
            :::.:  ...:|:        | :||..|.| ...|.....||.|.:.::|              
  Fly  1096 RMENV--SPSIQK--------C-IRRHTAHLDLKGLAEEENQSPPLVDQLR-------------- 1135

  Fly   504 TCQETLLIRNVPLLQQAYKYLVDDIDACLEKLLITAPRSKARKASVLLVFHLSAL--AALAKQTS 566
                        .||   |::.|:   ||:             ..|..:.||..|  ....|..|
  Fly  1136 ------------FLQ---KHITDE---CLQ-------------VRVYALQHLGDLFGRRRPKLNS 1169

  Fly   567 SIIGMYACKP---SILELLLTNCRAHELKFWSKYPAAQQAIFGLL----VVHCQANHNFRTN--- 621
            :|:.....:|   .|:.:|:..|:..:    |:...|.....|.|    ..:..:|:||.:.   
  Fly  1170 TILSELPLEPMLEQIVNVLMAGCQHDD----SQLQMASAKCLGELGAIDASYLPSNYNFASPQHL 1230

  Fly   622 --------------SSLLRDQELSAENTSPTANSFASILRFLDSVLGQAHQLAPQNLRVLLQWIQ 672
                          :||.|..:.. :||. ..:||:..::...::.|    ::|:..:.:..| |
  Fly  1231 PLNILSDDFAVLALTSLCRGYQFQ-QNTK-HVDSFSLAIQETLAICG----ISPKEQKKVQLW-Q 1288

  Fly   673 MLLRECREKIDLLMEQENFRGICRNIAATASKLVPLESAACIQTVLDYG---------------L 722
            .|....|:.::.::..      |.......|        .|:|..| :|               .
  Fly  1289 SLPARMRQLMEPMLHS------CYTCVHRPS--------TCLQQPL-FGSHYSHNYYEEWAFLWA 1338

  Fly   723 ERLEKY-PK-----LLILYRDTALQQLQMLSTNYHAPYFQIYAQLPL------HL------TLTG 769
            .||..| |.     ||..|:....:...||||.|  ||..::|.|..      |:      .|..
  Fly  1339 SRLIDYLPSSGRRHLLSSYKPCIKRDSNMLSTFY--PYILLHALLECTTEQRNHIQEEFMAVLQA 1401

  Fly   770 GESSMPGMASRRVSVWQQRISQYSAVRDNVFRDFFDRVQ----KPEQDSLIHCLRELFVRSCQVA 830
            .|.|...:..|:         :..|:::|.|:.|..|..    ||...:|:              
  Fly  1402 NEESSSSVRGRQ---------ELGAIKENAFKQFESRKYAAGIKPLASTLV-------------- 1443

  Fly   831 PQDERQMNLSQCTKRCQRLAIAWLQFEAARYCVD-QRL--RTTVGKPQETFLGFEAIIMRHARLL 892
              .:|:.:.|:..:...:|....|.| ..|:..: ||:  |:|.|||.||               
  Fly  1444 --SDRKEDSSRVPRLAGKLCAELLDF-LQRWLREWQRIHGRSTGGKPPET--------------- 1490

  Fly   893 SGCAKEIERSALDDLSLEELLSMQSNLSLLLGFLDALEKLI-----YNAAEGSAFALRPPEKQVA 952
                                  :.||...:..||:.:.||:     ||..|.:.           
  Fly  1491 ----------------------IDSNYRKIHEFLNLIPKLLVSRASYNCGEYAR----------- 1522

  Fly   953 AFFRLNNPTCQSWFNRIRIGVVIIAMHVQQPELVIRYAQQILVNSKTQDPTYSQAIVYMAWSLVS 1017
                                             .:.|.:..|...:.:.....:...::.....|
  Fly  1523 ---------------------------------ALSYLESYLEEGEDKSQRLLEQFTFLVEVYGS 1554

  Fly  1018 CQEADSLRGLRLWARGKSCKSYKWLKYAAD----QAAGKRESALAGYRTILAEKELQSELEP-HT 1077
            .::.||:.|      ....:||. :....|    :...:::..:..|..:|:..:   :::| |.
  Fly  1555 LRDPDSVEG------AVQVRSYD-MSVTQDILVNRLVERQQDMITSYEQLLSSTD---QMQPDHV 1609

  Fly  1078 RQFV------VSQMMQCLQDLGQWSQLVELKQQQMTRPEDRELNPFLQRSNVEVNALERLLAKSE 1136
            |..:      ..:..|.:.| |.|.:|.:....|.......||             |.||     
  Fly  1610 RAMIDAYLRDTPKTAQLIAD-GLWQRLSDRYSDQCFAECKSEL-------------LWRL----- 1655

  Fly  1137 ESCSSMDALGGVFQQLSLWPSNWDESVSSSGLSERASFSSIHMRQRTEDIVLHKLLEDRCVPDQA 1201
                      |.:.::....|||....|...|..|        |..|..|....||:.       
  Fly  1656 ----------GSYDEMEELQSNWPAQCSQGCLKLR--------RPLTTRIEFDSLLDG------- 1695

  Fly  1202 KNLLDTQWRDSLLNPSFDQRSCK-----------ELTLLRHIVQGVSGGQELSLLPVSSGRCQNR 1255
                   .|:|:|.   :.|||.           :..|..|:|      .||             
  Fly  1696 -------MRESVLE---ELRSCSAVQQHSYANAYDAVLKLHLV------HEL------------- 1731

  Fly  1256 SKFISSAILMRCLAWTQLLRQHCAPGSWETLCLDAAAAAREEGNLQLAETLLTQFFG-------- 1312
                                 ||:....|.|..|     |:|.|   .|.|:..:|.        
  Fly  1732 ---------------------HCSQELVEKLEQD-----RDEDN---QEKLMKNYFDDWQYRLQI 1767

  Fly  1313 -QPIGEI-AALFSLEQGVQTDNPEMLRGYSELVKCLHLQQQQSQTHSGDLSSSIDVCAALCLN-- 1373
             ||...| .:::|..:.:..:....|...:.|:.  ||:.:               .|.:.||  
  Fly  1768 VQPQVRIQESIYSFRRNILAELQRRLTDRNHLLP--HLKTE---------------LARIWLNSA 1815

  Fly  1374 -IQKSNNQPAAGADLLLNLADWIAVRTCNGLTTNQSPVLIQLLDQLPECPLTCDSSQPLAIPQAE 1437
             |.::..|.......:|..|::    ..:||...::.:|.|..||:            :|:...|
  Fly  1816 QINRNAGQLQRAQLYILKAAEY----QPSGLFIERAKLLWQKGDQV------------MAMNYLE 1864

  Fly  1438 RMVARLVHSCLQQRPNYAEALIAYGNWCYRWGKKVADSCCVLTQADATAISQALDIPQPLESEKL 1502
            ..::.:...|    ....:.|.|.....:..||                                
  Fly  1865 EQLSIMRSGC----QGNVKQLAAEQRHLFFRGK-------------------------------- 1893

  Fly  1503 DELLQALSTEQPPANCVEVCPDAARARDDEAAKNRLRRLTFLADKTPEALDAILQIWRRAIANTY 1567
              .|||:.:    |..:.:|                             .||:|:.::.|||   
  Fly  1894 --YLQAVYS----AESMHLC-----------------------------ADAVLKYFQEAIA--- 1920

  Fly  1568 DYYKDAARSYFQYLSF-------KSGSGPEKPEGEG-------VVSQRERLHVDDSNLVTTTLRL 1618
             .::.:...:.|...|       :.| |..:|.||.       :|:..:.|.....::..:..||
  Fly  1921 -VHRQSESCHVQMAQFLEKILEARQG-GKSEPTGEQDDMLINVMVNYAKSLRYGSEHVYQSMPRL 1983

  Fly  1619 LRLIV---------KHASGLQEVLEQGLHTTPIAPWKVIIPQLFSRLNHHEPYVRKSVCDLLCRL 1674
            :.|.:         :....:.::|.......|.|.:..:..|:.|||.|....|...:.:::.:|
  Fly  1984 ISLWLDTTESSTNTEQVKKMNDLLTNCCTALPTAVFYTVYSQMLSRLCHPVNDVFTVLRNVIIKL 2048

  Fly  1675 AKSRPQLVIFPAVVGANREQQDATAPPATARPTTEDACCYGYLLGELSKQAPEAVQHVKLMVKEL 1739
            .::.||..::                               .||..........::..||::.:.
  Fly  2049 VEAYPQQSLW-------------------------------MLLPHFKSAKAHRIKRCKLVLTDS 2082

  Fly  1740 RRVCLLWDEYWIHSLAHIYNTYVSRVSALATDFRPDDHEGKNNRFNVWRPQLLADLEALVAVTSR 1804
            |     ........|...:|:...|:..|.           |....:.|...|:||:..::...:
  Fly  2083 R-----LQNSTFQKLLQDFNSLTERLMDLT-----------NKEVTLDRTYKLSDLDTRLSKLCK 2131

  Fly  1805 PPE-TTYERSFRKRFDAPIRLTVDALRHRRYPEAWDKLKQLYHILQSNMIRGSGSTLKMQSIS-- 1866
            .|| :.....|.|.....:.|..|                      ||...||.......:::  
  Fly  2132 QPEFSQILLPFEKYMQPTLPLNSD----------------------SNSSEGSHLPANQSTVNWF 2174

  Fly  1867 PVLCGIGRMRISMPGLDAHGPDGDQVYIESVESSVCVLPTKTKPKKVAFYGSNGQRYTFLFKGME 1931
            |.                     .|:||...:.||.:|.:..||||:....|:|:.|..|.|..:
  Fly  2175 PY---------------------QQIYISGFQESVLILRSAAKPKKLTIRCSDGKDYDVLVKPKD 2218

  Fly  1932 DLHLDERIMQFLSISNAIMACRSDAPGNGCYRAHH---YSVIPLGPQSGLISWVDGVTPVFALYK 1993
            ||..|.|:|:|..:....:  ..|||..  .|..|   |:|:|...:.||:.|:    |..|.|:
  Fly  2219 DLRRDARLMEFNGLVKRYL--HQDAPAR--QRRLHIRTYAVLPFNEECGLVEWL----PNLASYR 2275

  Fly  1994 K-----WQQRRSQVAGNAGAGAVANVP-----RRFTDLFYNKLSPLLAKHNMQVSDPR--RQWPI 2046
            .     :.||| .|.......::| ||     .|..::|..:|.|         :.|.  ::|  
  Fly  2276 SICMNLYAQRR-LVMSTRQLQSLA-VPLHESIERKREVFTKQLVP---------AHPPVFQEW-- 2327

  Fly  2047 SVLLQVLDELSQE--TPNDLLARELWCQAGNAAEWRQSVRRFVRCMSVMSMIGYVIGLGDRHLDN 2109
                     |.|.  ||:.      |.:|.|.         ::|.::||||:||::||||||.:|
  Fly  2328 ---------LRQRFATPHS------WYEARNT---------YIRTVAVMSMVGYILGLGDRHGEN 2368

  Fly  2110 VLINLGSGDIVHIDYNVCFEKGRTLRIPEKVPFRLTQNLVQAMGITGIEGPFRLGCEYVLKVMRK 2174
            :|...|:||.||:|:|..|.:|..|..||.||||||.|::.|||..|:||.||..||..|:::::
  Fly  2369 ILFAEGNGDAVHVDFNCLFNQGELLPYPEVVPFRLTHNMIVAMGPLGVEGSFRKCCEITLRLLKQ 2433

  Fly  2175 ERETLLTLLEAFVYDPLVDWTTNDDAQALRRSLNAKL----QESADGGGAGGLGVGDLKYH-KKD 2234
            |.:||:::|..||||.        .||..:.:..||:    |..||          .|:.| |:.
  Fly  2434 ESKTLMSILRPFVYDV--------GAQTRKGAATAKITKDVQRIAD----------RLQGHVKRQ 2480

  Fly  2235 KNKGKPLDSD 2244
            :....||.::
  Fly  2481 QANSIPLSTE 2490

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonCNP_001284967.1 SMG1 571..1140 CDD:292413 108/648 (17%)
Rapamycin_bind 1738..1845 CDD:285924 16/107 (15%)
PIKKc_SMG1 1894..2196 CDD:270714 106/318 (33%)
FATC 3189..3217 CDD:280430
mei-41NP_523369.2 UME 955..1060 CDD:214825 18/105 (17%)
FAT 1653..1985 CDD:280429 86/528 (16%)
PIKKc_ATR 2181..2448 CDD:270625 104/311 (33%)
FATC 2486..2517 CDD:280430 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45464453
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11139
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
32.930

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