DRSC/TRiP Functional Genomics Resources

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Protein Alignment nonC and CG30184

DIOPT Version :9

Sequence 1:NP_001284967.1 Gene:nonC / 31625 FlyBaseID:FBgn0263968 Length:3218 Species:Drosophila melanogaster
Sequence 2:NP_726341.1 Gene:CG30184 / 246506 FlyBaseID:FBgn0050184 Length:223 Species:Drosophila melanogaster


Alignment Length:94 Identity:25/94 - (26%)
Similarity:32/94 - (34%) Gaps:40/94 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly  2343 TERLPDF---GRVQCILRSYGQCLQLYH---LLDLQGQLVKLQMESNSENAREFSALTEALQLSG 2401
            |||.|.|   .|...|:..|...:.|.|   .|||        |.|:|                 
  Fly   101 TERWPSFYACCRDNAIVALYAGAIYLMHCTFALDL--------MFSHS----------------- 140

  Fly  2402 LDSMRSQLNELLGRMDMVAQKSSKHLQEY 2430
                ||:.|:     .|..|:|.:.||.|
  Fly   141 ----RSRANQ-----KMHPQRSKRPLQLY 160

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonCNP_001284967.1 SMG1 571..1140 CDD:292413
Rapamycin_bind 1738..1845 CDD:285924
PIKKc_SMG1 1894..2196 CDD:270714
FATC 3189..3217 CDD:280430
CG30184NP_726341.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.900

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