DRSC/TRiP Functional Genomics Resources

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Protein Alignment nonC and Pik3c3

DIOPT Version :9

Sequence 1:NP_001284967.1 Gene:nonC / 31625 FlyBaseID:FBgn0263968 Length:3218 Species:Drosophila melanogaster
Sequence 2:NP_852079.2 Gene:Pik3c3 / 225326 MGIID:2445019 Length:887 Species:Mus musculus


Alignment Length:364 Identity:74/364 - (20%)
Similarity:136/364 - (37%) Gaps:109/364 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1843 QLYHILQSNMIRGSGSTLKMQSISPVLCGIGRMRISMPGLDAHGPDGDQVYIESVESSVCVLPTK 1907
            :|.|:::: :.|.||:..|.......|.|                |.:::.:..||.....|..:
Mouse   551 RLVHLMKA-VQRESGNRKKKNERLQALLG----------------DNEKMNLSDVELIPLPLEPQ 598

  Fly  1908 TK-----------------PKKVAFYGSNGQRYTFLFKGMEDLHLDERIMQFLSISNAIMACRSD 1955
            .|                 |.::.|...:|.:|..:||..:||..|:.|:|.:|:.:.::  |.:
Mouse   599 VKIRGIIPETATLFKSALMPAQLFFKTEDGGKYPVIFKHGDDLRQDQLILQIISLMDKLL--RKE 661

  Fly  1956 APGNGCYRAHHYSVIPLGPQSGLISWVDGVTPVFALYKKWQQRRSQVAGNAGAGAVANVPRRFTD 2020
               |...:...|.|:....:.|.:.::..| ||           ::|...  .|::.|..|::. 
Mouse   662 ---NLDLKLTPYKVLATSTKHGFMQFIQSV-PV-----------AEVLDT--EGSIQNFFRKYA- 708

  Fly  2021 LFYNKLSPLLAKHNMQVSDPRRQWPISVLLQVLDELSQETPNDLLARELWCQAGNAAEWRQSVRR 2085
                               |....|..:..:|:|                              .
Mouse   709 -------------------PSETGPYGISAEVMD------------------------------T 724

  Fly  2086 FVRCMSVMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKGRTLRIPEKVPFRLTQNLVQ 2150
            :|:..:...:|.|::|:|||||||:|:. .:|.:.|||:.  :..||..: |...|.:|.:.:|:
Mouse   725 YVKSCAGYCVITYILGVGDRHLDNLLLT-KTGKLFHIDFG--YILGRDPK-PLPPPMKLNKEMVE 785

  Fly  2151 AMGITGIE--GPFRLGCEYVLKVMRKERETLLTLLEAFV 2187
            .||.|..|  ..||..|......:|:....:|.|....|
Mouse   786 GMGGTQSEQYQEFRKQCYTAFLHLRRYSNLILNLFSLMV 824

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
nonCNP_001284967.1 SMG1 571..1140 CDD:292413
Rapamycin_bind 1738..1845 CDD:285924 0/1 (0%)
PIKKc_SMG1 1894..2196 CDD:270714 65/313 (21%)
FATC 3189..3217 CDD:280430
Pik3c3NP_852079.2 C2_PI3K_class_III 26..186 CDD:176042
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 149..170
PI3Ka_III 283..503 CDD:238442
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 415..466
PI3Kc_III 539..883 CDD:270628 74/364 (20%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5032
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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