Sequence 1: | NP_001284967.1 | Gene: | nonC / 31625 | FlyBaseID: | FBgn0263968 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_035289.2 | Gene: | Prkdc / 19090 | MGIID: | 104779 | Length: | 4128 | Species: | Mus musculus |
Alignment Length: | 2859 | Identity: | 514/2859 - (17%) |
---|---|---|---|
Similarity: | 912/2859 - (31%) | Gaps: | 1068/2859 - (37%) |
- Green bases have known domain annotations that are detailed below.
Fly 75 GGGKSHDVAQAFANALLLRNMNHVVGKGQPVVQ-NHRK-AYQCKGDTIN-PMANGEDLRLSKIIR 136
Fly 137 RLINENNP-TVSLELCSKLDQAVR-------------TPINMGYMTCSFVWILDNMLTLYKQCPP 187
Fly 188 PVLEECSKTLGLIGFINRKSYPIYEEFIVKNYKSSKRMQKYMIMALRATLSCDTKCELHMYADKI 252
Fly 253 MLL-------------LKDFLENAESADIFIVVSNTLVQFAASYAETFEC--HFTDVVDIVIGWQ 302
Fly 303 LEAGQPTDLKTHCAQVLEQLTPFFSKQIDFSYGLLDQFVEDITTLEEGEPANTAERVGAFVGAFN 367
Fly 368 TLLKCLARMQIFVGMPTCECIVKMAVDHLIKIMPTLHLNTEALVNINELICI--CLLNNFTGLDP 430
Fly 431 ILLEQVLLDQVKRMISLTELQRQSVLYLLLCTVRRLRARLTPSLVHFIFQSNPYMTKVRLRSPGE 495
Fly 496 TSYKLLLRTCQETLLIRNVPLLQQAYKY---LVDDIDACLEKLLITAPRSKARKASVLLVFHLSA 557
Fly 558 LA---ALAKQ---------TSSIIG---------MYACKPSILELLLTNCRAHELKFWSKY---- 597
Fly 598 -PAAQQAIFGLLV---------------------------------------VHCQANHNFRTNS 622
Fly 623 SL------------LRDQELSAENTSPTANSF--------------------------------- 642
Fly 643 ----------------ASI-------LRFLDSVLGQAHQLAPQNLRVLL---------------- 668
Fly 669 QWIQMLLR--EC---REKIDLLMEQENFRGICRNIAATASKLVPLESAACI-------------- 714
Fly 715 --------QTVLDYGLERLEKYPK-----LLILYR----------------DTALQQLQMLSTNY 750
Fly 751 HAP------------------------YFQIYAQLPLHLTLTGGESSMPGMASRRVSVWQQRISQ 791
Fly 792 YSAVRDNVFRDF--------FDRVQKPEQDSLIHCLRELFVRSCQVAPQDERQMNL--------- 839
Fly 840 ----SQCTK----RCQRLAIAWLQ------FEAARYCVDQRLRTTVGKPQETFLGFEAIIMRHAR 890
Fly 891 LLS-----------GCAKEI------------ERSALDDLSLEELLSMQSNLSLLLGFLD---AL 929
Fly 930 EKLIYN----------------AAEGSAFALRPPEKQV-----AAFFRLN---------NP---- 960
Fly 961 ---TCQ--------SWFNRIRIGVVIIAMHVQ---QPELVIRYAQQILVNSKTQDP--------- 1002
Fly 1003 ---TYSQAIVYMAWSLVSCQEADSLRGLRLWARGKSCKSYKWLKYAADQAAGKRESALAGYRTIL 1064
Fly 1065 AEKELQSELEPHTRQFVVSQMMQCLQDLGQWSQLVELKQQQMTRPEDRELNPFLQ--RSNVEVNA 1127
Fly 1128 LERLLAKSEESCSSMDALGGVFQQLSLWPSNWDESVSSSGLSERASFSSIHMRQRTEDIVLHKLL 1192
Fly 1193 EDRCVPDQAKNLLDTQWRDSLLNPSFDQRSCKELTLLRHIVQGVSGG--QELSLLPVSSGR---- 1251
Fly 1252 ---CQNRSKFISSAIL-----MRCLAWTQLLRQH-----CAPGSWETLCLDAAAAAREEGNLQLA 1303
Fly 1304 ETLLTQFFGQ--PIGEIAALFSLEQGVQTDNPEMLRGYSELVKCLHLQQQQSQTHSGDLSSSI-- 1364
Fly 1365 --------------DVCAALCL------NIQKSNNQPA---------AGADLLLNLADWIAVRTC 1400
Fly 1401 NGLTT--------------------------------------NQSPVLIQLLD-----QLPECP 1422
Fly 1423 LTCDSSQPLA--------IPQAERMVARLVHSCLQQRPNYA-----------------------E 1456
Fly 1457 ALIAY-----------------GNWCYR-----------WGKKVADSCCVLTQADATAISQALDI 1493
Fly 1494 PQPLESEKLDELLQALSTE----QPPANC-VEVCPDAARARDDEAA---KNRLRRLTFLADKTPE 1550
Fly 1551 ALDAILQIWRRAIANTYDYYKDAARSYFQ------YLSFKSGSGPEKPEGEGVVSQRERLHVDDS 1609
Fly 1610 NLVTTTLRLLRLIVKHASGLQEVLEQG-------LHTTPIAPWKVIIPQLFSRLNHHEPYVRKSV 1667
Fly 1668 CDLLCRLAKSRPQLVIFPAVVGANR-----------EQQDATAPPATARPTTEDACCYGYLLGEL 1721
Fly 1722 SKQA------------PEAVQHVK--------LMVKELRRV-CLLWDEY-WI------------- 1751
Fly 1752 ---HSLAHIYNTYVSR------VSALATDFRPDDHEGKNNRFNVWR------------------- 1788
Fly 1789 ----PQLL-----ADLEALVA---VTSRPPETTYERSFRKRFD------APIRLTVDALRHRRYP 1835
Fly 1836 EAWDKLKQLYHILQSNMIRGSGS------TLKMQSISPVLCGI-GRMRISM------PG-LDAHG 1886
Fly 1887 P--------------------DGD-------QVYIESVESSVCVLPTKTKPKKVAFYGSNGQRYT 1924
Fly 1925 FLFKGMEDLHLDERIMQFLSISNAIMACRSDAPGNGC----YRAHHYSVIPLGPQSGLISWVDGV 1985
Fly 1986 TPVFAL-----------------------YKKWQQRRSQVAGNAGAGAVANVPRRFTDLFYNKLS 2027
Fly 2028 PLLAKHNMQVSDPRRQWPISVLLQVLDELSQETPNDLLARELWCQAGNAAEWRQSVR-RFVRCMS 2091
Fly 2092 VMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKG-RTLRIPEKVPFRLTQ---NLVQAM 2152
Fly 2153 GITGIEGPFRLGCEYVLKVMRKERET--LLT-LLEAFVYDPLVDWTTNDDAQALRRSLNAKLQE 2213 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nonC | NP_001284967.1 | SMG1 | 571..1140 | CDD:292413 | 138/887 (16%) |
Rapamycin_bind | 1738..1845 | CDD:285924 | 31/167 (19%) | ||
PIKKc_SMG1 | 1894..2196 | CDD:270714 | 90/336 (27%) | ||
FATC | 3189..3217 | CDD:280430 | |||
Prkdc | NP_035289.2 | HEAT 1 | 288..323 | ||
HEAT 2 | 1001..1037 | ||||
HEAT 3 | 1050..1086 | ||||
Interaction with C1D. /evidence=ECO:0000250 | 1501..1536 | 5/15 (33%) | |||
Leucine-zipper | 1501..1536 | 5/15 (33%) | |||
TPR 1 | 1720..1753 | 8/55 (15%) | |||
ArAE_1_C | <1766..1822 | CDD:288564 | 11/75 (15%) | ||
NUC194 | 1812..2198 | CDD:285387 | 75/455 (16%) | ||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2049..2071 | 4/21 (19%) | |||
KIP-binding. /evidence=ECO:0000250 | 2432..3213 | 143/876 (16%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2614..2635 | 3/20 (15%) | |||
FAT | 3024..3470 | CDD:280429 | 72/466 (15%) | ||
PIKKc_DNA-PK | 3719..4014 | CDD:270716 | 89/335 (27%) | ||
FATC | 4097..4128 | CDD:280430 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E1_COG5032 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D26975at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
2 | 1.910 |