Sequence 1: | NP_001284967.1 | Gene: | nonC / 31625 | FlyBaseID: | FBgn0263968 | Length: | 3218 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001361976.1 | Gene: | smg-1 / 172418 | WormBaseID: | WBGene00004879 | Length: | 2324 | Species: | Caenorhabditis elegans |
Alignment Length: | 2562 | Identity: | 603/2562 - (23%) |
---|---|---|---|
Similarity: | 1034/2562 - (40%) | Gaps: | 607/2562 - (23%) |
- Green bases have known domain annotations that are detailed below.
Fly 150 LCSKLDQAVRTPINMGYMTCSFVWILDNMLTLYKQCPPPVLEE--------CSKTLGLIGFI--N 204
Fly 205 RKSYPIYEEFIVKNYKS-SKRMQK---------YMIMAL------RATLSCDTKCELHMYADKIM 253
Fly 254 LLLKDFLENAESADI-------FIVVSNTLVQFAASYAETFECHFTDVVDIVIGWQLEAGQPTDL 311
Fly 312 KTHCAQVLEQLTPFFSKQIDFSYGLLDQFVEDITTLEEGEPANTAERVGAF--------VGAFNT 368
Fly 369 LLKCLARMQIFVGMPTCECIVKMA-----VDHLIKIMPTLHLNTE---------ALVNI-----N 414
Fly 415 ELICICLLNNFTGLDPILL----EQVLLDQVK--RMISLTELQRQSVLYLLLCTVRRLRAR-LTP 472
Fly 473 SLVHFIFQSNPYMTKVRLRSPGETS---------YKLLLRTCQETLLIRNVPLLQQAY----KYL 524
Fly 525 VDDIDACLEKLLITAPRSKAR-KASVLLVFHLSALAALAKQTSSIIGMYACKPSILELLLTNCRA 588
Fly 589 HELKFWSKYPAAQQAIFGLLVVHCQANHNFRTNSSLLRDQELSAENTSPTANSFA--SILRFLDS 651
Fly 652 VLGQAHQLAPQNLRVLLQWIQMLL-RECREKI--DLLMEQE--------------NFRGICRN-- 697
Fly 698 --IAATASKLVPL------------------------ESAAC-------IQTVLDYGLERLEKYP 729
Fly 730 KLLILYRDTALQQLQMLSTNYHAPYFQIYAQLPLHLTLTGGESSMPGMASRRVSVWQQRISQYSA 794
Fly 795 VRDNVFRDFFDRVQKPEQDSLIHCLRELFVRSCQVAPQDERQMNLSQCTKRCQRLAIAWLQFEAA 859
Fly 860 RYCVDQRLRTTVGKPQETFLGFEAIIMRHAR---LLSGCAKEIERSALDDLSLEELL--SMQ-SN 918
Fly 919 LSLLLGFLDALEKLIYNAAEGSAFALRPPEKQVAA--FFRLNNPTCQSWFNRIRIGVVIIAMHVQ 981
Fly 982 QPELVIRYAQQILVN-SKTQDPTYSQAIV-------YMAWSLVSCQEADSLRGLRLWAR------ 1032
Fly 1033 -GKSCKSYKWLKYAADQAAGKRESALAGYRTILAEKELQSELEPHTRQFVVSQMM---------- 1086
Fly 1087 ------------------QCLQDLGQWSQLVELKQQQMTRPEDRELNPFLQRSNVEV--NALERL 1131
Fly 1132 LAKSE-----ESCSSMDALGGVFQQLSLWPSNWDESVSSSGLSERAS---FSSIHMRQRTEDIVL 1188
Fly 1189 HKLLEDRCVPDQAKN-LLDTQWRDSLLNPSFDQRS----------CKELTLL-RHIV----QGVS 1237
Fly 1238 GGQELSLLPVSSGRCQNRSKFISSAILMRCLAWTQLLRQHCAPGSWETLCLDAAAAAREEGNLQL 1302
Fly 1303 AET----LLTQFFGQPIGEIAALFSLEQGVQTDNPEMLRGYSELVKCLHLQQQQSQTHSGDLSSS 1363
Fly 1364 IDVCAALCLNIQKSNNQPAAGADLLLNLADWIAVRTCNGLTTNQSPVLIQLLDQLPECPLTCDSS 1428
Fly 1429 QPLAIPQAERMVARLVHSCLQQRPNYAEALIAYGNWC----------------YRWGKKVADSCC 1477
Fly 1478 VLTQADATAISQALDIPQPLESEKLDELLQALSTEQPPANCVEVCPDAARARDDEAAKNRLRRLT 1542
Fly 1543 FLADKTPEALDAILQIWRRAIANTYDYYKDAARSYFQYLSFKSGSGPEKPEGEGVVSQRERLHVD 1607
Fly 1608 DSNLVTT--TLRLLRLIVKHASGLQEVLEQGLHTTPIAPWKVIIPQLFSRLNHHEPYVRKSVCDL 1670
Fly 1671 LCRLAKSRPQLVIFPAVVGANREQQDATAPPATARPTTED-----ACCYGYLLGELSKQAPEAVQ 1730
Fly 1731 HVKLMVKELRRVCLLWDEYWIHSLAHIYNTYVSRVSALATDFRPDDH-----EGKNNRFNVWRPQ 1790
Fly 1791 LLAD-----LEALVAVT-SRPPETTYERSFRKRFDAPIRLTVDALRHRRY-----PE-AWDKLKQ 1843
Fly 1844 LY-HILQSNMIRGSGSTLKMQSISPVLCGIGRMRISMPGLDAHGPDGDQVY-IESVESSVCVLPT 1906
Fly 1907 KTKPKKVAFYGSNGQRYTFLFKGMEDLHLDERIMQFLSISNAIMACRSDAPGNG-------CYRA 1964
Fly 1965 HHYSVIPLGPQSGLISWVDGVTPVFALYKKWQQRRSQV--AGNAGAGAVANVPRRFTDLFYNKLS 2027
Fly 2028 PLLAKHNM--QVSDPRRQWPISVLLQVLDELSQETPNDLLARELWCQAGNAAEWRQSVRRFVRCM 2090
Fly 2091 SVMSMIGYVIGLGDRHLDNVLINLGSGDIVHIDYNVCFEKGRTLRIPEKVPFRLTQNLVQAMGIT 2155
Fly 2156 GIEGPFRLGCEYVLKVMRKERETLLTLLEAFVYDPLVDWTTNDDAQALRRSLNAKLQESADGGGA 2220
Fly 2221 GGLGVGDLKYHKKDKNKGKPLDSDVKRQPFLSKLGMLQKYWSTNKTEL---MPQLEE---MEQEV 2279
Fly 2280 GNLQAAQAKQ-VVAEEELVK-LNQRSALIAEIKSLGTAIESH--------SFNTASLRNAVRRGH 2334
Fly 2335 SEALALLSTERLPDFGRVQCILRSYGQCLQLYHLLDLQGQLVKLQMESNSENAREFSALTEALQL 2399
Fly 2400 SGLDSM---------RSQLNELLGRMD 2417 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
nonC | NP_001284967.1 | SMG1 | 571..1140 | CDD:292413 | 126/680 (19%) |
Rapamycin_bind | 1738..1845 | CDD:285924 | 30/123 (24%) | ||
PIKKc_SMG1 | 1894..2196 | CDD:270714 | 147/312 (47%) | ||
FATC | 3189..3217 | CDD:280430 | |||
smg-1 | NP_001361976.1 | SMG1 | 468..984 | CDD:374109 | 115/577 (20%) |
PIKKc_SMG1 | 1753..2060 | CDD:270714 | 147/312 (47%) | ||
FATC | 2293..2323 | CDD:367005 | |||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C160166609 | |
Domainoid | 1 | 1.000 | 275 | 1.000 | Domainoid score | I934 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 519 | 1.000 | Inparanoid score | I691 |
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D12810at33208 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0007362 | |
OrthoInspector | 1 | 1.000 | - | - | oto18837 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_104562 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
RoundUp | 1 | 1.030 | - | avgDist | Average_Evolutionary_Distance | R2799 |
SonicParanoid | 1 | 1.000 | - | - | X6240 | |
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
10 | 9.920 |