DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atx-1 and ATXN1

DIOPT Version :10

Sequence 1:NP_572356.1 Gene:Atx-1 / 31624 FlyBaseID:FBgn0029907 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_000323.2 Gene:ATXN1 / 6310 HGNCID:10548 Length:815 Species:Homo sapiens


Alignment Length:154 Identity:59/154 - (38%)
Similarity:89/154 - (57%) Gaps:26/154 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 PPSLPPPSQQHWSSNGFSDDSASCFRRGSYIELASGAMRRVEDIRTEDFIQSALRSQLFELREAT 84
            ||:|||                 .|.:||.|:||:|.:::|||::||||||||..|...::..:|
Human   567 PPTLPP-----------------YFMKGSIIQLANGELKKVEDLKTEDFIQSAEISNDLKIDSST 614

  Fly    85 VVRIDWSGCPSLVTLTFSYDTHHAKMDLQVQPGHPMFVYGQGWASCDPQLSLQLYELKCQQLQVG 149
            |.||:.|..|.:..:.|:...|.|::.::|...:|.||:||||:||.|:.:.||::|.|.:|.||
Human   615 VERIEDSHSPGVAVIQFAVGEHRAQVSVEVLVEYPFFVFGQGWSSCCPERTSQLFDLPCSKLSVG 679

  Fly   150 DICLSL---------VPNEQPAAP 164
            |:|:||         |...||..|
Human   680 DVCISLTLKNLKNGSVKKGQPVDP 703

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atx-1NP_572356.1 AXH 43..158 CDD:197779 51/123 (41%)
ATXN1NP_000323.2 ATXN-1_C 1..558 CDD:463627
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..63
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 185..270
polyglutamine repeat 197..225
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 329..355
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 397..424
Self-association. /evidence=ECO:0000269|PubMed:9097953 494..604 23/53 (43%)
Interaction with USP7. /evidence=ECO:0000269|PubMed:12093161 538..815 59/154 (38%)
RNA-binding. /evidence=ECO:0000269|PubMed:11136710 540..766 59/154 (38%)
AXH 573..688 CDD:197779 50/114 (44%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 762..798
Nuclear localization signal. /evidence=ECO:0000250|UniProtKB:P54254 794..797
Blue background indicates that the domain is not in the aligned region.

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