DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atx-1 and atxn1a

DIOPT Version :10

Sequence 1:NP_572356.1 Gene:Atx-1 / 31624 FlyBaseID:FBgn0029907 Length:230 Species:Drosophila melanogaster
Sequence 2:NP_001038291.2 Gene:atxn1a / 557340 ZFINID:ZDB-GENE-060503-759 Length:781 Species:Danio rerio


Alignment Length:188 Identity:64/188 - (34%)
Similarity:93/188 - (49%) Gaps:31/188 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 QMHMELSYGRGYDPIGRQPPSL----PPPSQQHWSSNGFSDDSASCFRRGSYIELASGAMRRVED 62
            |:|:         |:...|..|    ||||         :......|.:||.|:||.|.::||||
Zfish   502 QLHL---------PVVPAPAGLLTTPPPPS---------APSMPPYFTKGSIIQLADGELKRVED 548

  Fly    63 IRTEDFIQSALRSQLFELREATVVRIDWSGCPSLVTLTFSYDTHHAKMDLQVQPGHPMFVYGQGW 127
            ::||||||||..|...::..:||.|||.|...:...:.|:.....:::.::|...:|.||:||||
Zfish   549 LKTEDFIQSAEISNELKIDSSTVERIDSSHTANFAIIQFAVGAQRSQVSVEVLVEYPFFVFGQGW 613

  Fly   128 ASCDPQLSLQLYELKCQQLQVGDICLSL---------VPNEQPAAPCPPQPAPPPPCP 176
            :||.|..:.||.||.|.:|.|||:|:||         :...|......|...||...|
Zfish   614 SSCCPDRTTQLLELPCTKLSVGDVCISLTLKNLRNGSIKKSQGQVLDAPALGPPLKSP 671

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atx-1NP_572356.1 AXH 43..158 CDD:197779 50/123 (41%)
atxn1aNP_001038291.2 None

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