DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment xit and alg8

DIOPT Version :9

Sequence 1:NP_572355.1 Gene:xit / 31623 FlyBaseID:FBgn0029906 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_001076820.1 Gene:alg8 / 548388 XenbaseID:XB-GENE-967047 Length:542 Species:Xenopus tropicalis


Alignment Length:518 Identity:259/518 - (50%)
Similarity:339/518 - (65%) Gaps:40/518 - (7%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 LKILLIPAYHSTDFEVHRNWLAITHSLPLNQWYVDATSEWTLDYPPFFAYFEWLLSQVAKYVDPR 79
            ||.||:|.||||||||||||||||||||:::||.:||||||||||||||:||.||::||:||||.
 Frog    39 LKCLLLPTYHSTDFEVHRNWLAITHSLPVSKWYYEATSEWTLDYPPFFAWFEHLLAKVAQYVDPE 103

  Fly    80 MLVVDNLNYESKATVYFQRLSVIVTDLVYVLGVRSCLGSLGLGRDTQQF-----FAASMLLLLNV 139
            ||.|:||||.|:.||.|||||||:||::::.....|...:...:|.:..     |..::|||.|.
 Frog   104 MLKVENLNYASQETVLFQRLSVIITDILFIYAASQCCKCVNGRKDRRDLIQKPAFVLAVLLLWNF 168

  Fly   140 GLIFVDHIHFQYNGLLFGILLLSIGSLIRQRFLWSAFAFAVLLNFKHIFLYMAPAFGVYLLRFYC 204
            ||:.||||||||||.|.||:||||..|.::|.:.|||.||||||||||:||:|||:|:|:||.||
 Frog   169 GLLIVDHIHFQYNGFLSGIMLLSIARLYQKRVMESAFLFAVLLNFKHIYLYIAPAYGMYMLRSYC 233

  Fly   205 L----EQASVVSAVGAVVKLLVVGLT---PFAVSFGPF--WQQLPQVLSRLFPFKRGLTHAYWAP 260
            .    ...||.....:.::||.:|||   .||:|||||  ..||||||||||||||||.||||||
 Frog   234 FTGNNPDGSVRWRSFSCLRLLSLGLTVCSVFALSFGPFVYLGQLPQVLSRLFPFKRGLCHAYWAP 298

  Fly   261 NFWALYNAADKLAA--GV-LKVQDGG----ASTTSGLVQEVRHSVLPAITPPVTFALTALFMLPI 318
            |||||||..||..:  || |::.|..    .:.|.|||||..|||||::||..|...|.:.:||.
 Frog   299 NFWALYNMVDKALSIIGVKLQLLDPATIRTGTMTRGLVQEFEHSVLPSVTPMATLVCTLVSILPS 363

  Fly   319 LVKLFRSAKKQSPLVFLRAVVLCGCSSFVFGWHVHEKAILMVLLPLCLLTLVNREDARYAYVLGI 383
            :::|:|  |.|.|..|||.::||...||:|||||||||||:.:|||.:|::.:.:||....||..
 Frog   364 VLRLWR--KPQGPTGFLRCLILCALGSFMFGWHVHEKAILLAILPLSILSVTSAKDAGIFLVLAT 426

  Fly   384 AGYFSLFPLLFDADLYIPRYSLYMSYVAMMYGQLYRIFPGFRGFHTLEW---LYMLGFMAIPLYE 445
            .|:||||||||.|.....:..|.:.:.......|..:|...|..  |.|   ||:.|.:.:..:.
 Frog   427 TGHFSLFPLLFTAPELPIKVLLMLIFTVFSVSALRAMFQRERAL--LSWVETLYLCGLVPLGAFC 489

  Fly   446 HLLSFLLHLDQRLPFLPLLLTSVYSALGVLYFFGAYYLYALGISWGKVPIASSTSAAAVKRKR 508
            .::..|....|:|||:||||:|.|.||||.|            ||.::.|::.:...:.|:|:
 Frog   490 EVVYPLTSWHQQLPFVPLLLSSGYCALGVTY------------SWARLYISALSDLPSAKQKK 540

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
xitNP_572355.1 Alg6_Alg8 12..478 CDD:281190 254/486 (52%)
alg8NP_001076820.1 Alg6_Alg8 38..522 CDD:367361 254/498 (51%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 463 1.000 Domainoid score I470
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H6931
Inparanoid 1 1.050 467 1.000 Inparanoid score I1496
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D379099at33208
OrthoFinder 1 1.000 - - FOG0004662
OrthoInspector 1 1.000 - - oto105097
Panther 1 1.100 - - LDO PTHR12413
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X3274
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
88.160

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