DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment xit and algn-6

DIOPT Version :9

Sequence 1:NP_572355.1 Gene:xit / 31623 FlyBaseID:FBgn0029906 Length:511 Species:Drosophila melanogaster
Sequence 2:NP_495685.1 Gene:algn-6 / 182392 WormBaseID:WBGene00007435 Length:503 Species:Caenorhabditis elegans


Alignment Length:507 Identity:131/507 - (25%)
Similarity:206/507 - (40%) Gaps:117/507 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 PAYHSTDFEVHRNWLAITHSLPLNQWYVDATSE----WTLDYPPFFAYFEWLLSQVAKYVDPRML 81
            |.|  .|:|..|:|:.||.:||:.|||::.|..    |.|||||..||..:||..::..::.:.:
 Worm    75 PMY--GDYEAQRHWMEITVNLPIEQWYLNGTHNDLLYWGLDYPPITAYHHYLLGVISNKINKKWV 137

  Fly    82 -VVDNLNYESKATVYFQRLSVIVTDLVYVLGVRSCLGSLGLGRDTQQFFAAS--------MLLLL 137
             :..:..|||.|...|.|||.|:...::.|            .....:|..|        .|.||
 Worm   138 ELTTSRGYESIAHKLFMRLSAIIPFYIFYL------------PPLIFYFTRSKKMSPILYALALL 190

  Fly   138 NVGLIFVDHIHFQYNGLLFGILLLSIGSLIRQRFLWSAFAFAVLLNFKHIFLYMA-PAFGVYLLR 201
            ...|:.:|:.|||||.:..|:.|.:...|.:...:..:..|...||:|.:.||.| |.|...|.|
 Worm   191 YPSLLVIDNGHFQYNSISLGLFLATYMFLTKNFTIIGSILFVAALNYKQMELYHALPVFVFILAR 255

  Fly   202 FYCLEQASVVSAVGAVVKLLVVGLTPFAV-SFGPFWQQLP--------QVLSRLFPFKRGLTHAY 257
                 ..:......:..::|.:||  |.| :|...|  ||        .|:.|:|||.|||....
 Worm   256 -----SINKTQLFNSFRRILTIGL--FVVGTFLIIW--LPFLLTGTAKDVIIRVFPFNRGLYEDK 311

  Fly   258 WAPNFWALYNAADKLAAGVLKVQDGGASTTSGLVQEVRHSVLPAITPPVTFALTALFMLPILVKL 322
            .| :||..::.       :||                 ...|.::...::.||......|.|:.|
 Worm   312 VA-SFWCAFSF-------ILK-----------------RLPLQSVQIYISTALVLAGSAPSLLVL 351

  Fly   323 F-RSAKKQSPLVFLRAVVLCGCSSFVFGWHVHEKAILMVLLPLCLLTLVNREDARYAYVLGIAGY 386
            | |..:||    |..::...|.|.|:|.:|||||.||:..:|  .|.|::...:...:.|.|.. 
 Worm   352 FLRPTEKQ----FRISLTATGLSFFLFSFHVHEKTILLAAVP--ALLLISEYTSLVIWFLNITN- 409

  Fly   387 FSLFPLLFDADLYIPRYSLYMSYVAMMYGQLYRIFPGFRGFHTLEWLYMLGFMAIPLYEHLLSFL 451
            .|:|.|.. .|.:....|.:.:|..:.|                      .:.|.....|:|:.|
 Worm   410 ISIFSLCV-KDNFALSLSFFFAYFVVSY----------------------AYTAPRKISHILTIL 451

  Fly   452 LHL-----------DQRLPFLPLLLTSVYSALGVLYFFGAYYLYALGISWGK 492
            :..           :||.|.:..|..:.:|.:..:||.    ||....|:.|
 Worm   452 IGFAICILELYGPSNQRFPHIYQLANAFFSCVHFIYFL----LYLSFASFEK 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
xitNP_572355.1 Alg6_Alg8 12..478 CDD:281190 126/491 (26%)
algn-6NP_495685.1 Alg6_Alg8 74..490 CDD:281190 127/496 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.741681 Normalized mean entropy S1324
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D379099at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.870

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