DRSC/TRiP Functional Genomics Resources

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Protein Alignment Nf-YC and NF-YC11

DIOPT Version :10

Sequence 1:NP_572354.1 Gene:Nf-YC / 31622 FlyBaseID:FBgn0029905 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_187854.2 Gene:NF-YC11 / 820427 AraportID:AT3G12480 Length:293 Species:Arabidopsis thaliana


Alignment Length:278 Identity:62/278 - (22%)
Similarity:87/278 - (31%) Gaps:116/278 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 PLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTMHAWVHTEESRRRTLQRSDIAQAIANY 219
            |.|||||||:.||:...||...|:|.:|:.|.|:|:|....:..|.|...:|:....:...:..|
plant    10 PAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLKHCVERY 74

  Fly   220 DQFDFLIDIVPR-------------------------------------EEIKPSSAQKTKDGST 247
            :.||||.::|.:                                     ||.|.|..|:.....|
plant    75 NVFDFLREVVSKVPDYGHSQGQGHGDVTMDDRSISKRRKPISDEVNDSDEEYKKSKTQEIGSAKT 139

  Fly   248 SS--------SSGMAGAASSAA----------------------------------------STS 264
            |.        ..|..|.|:.||                                        ...
plant   140 SGRGGRGRGRGRGRGGRAAKAAEREGLNREMEVEAANSGQPPPEDNVKMHASESSPQEDEKKGID 204

  Fly   265 NTATSNA------------------AASVAGNATATGNFVASGSTVPATTAGGLKLDTTGATNAA 311
            .||.||.                  |.|:..|.|         ...|||   |....||.||::.
plant   205 GTAASNEDTKQHLQSPKEGIDFDLNAESLDLNET---------KLAPAT---GTTTTTTAATDSE 257

  Fly   312 EVLGFSTVN-SDIFSAQL 328
            |..|:..:: |.:..|||
plant   258 EYSGWPMMDISKMDPAQL 275

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YCNP_572354.1 HFD_NFYC-like 148..230 CDD:467033 27/74 (36%)
NF-YC11NP_187854.2 HFD_DRAP1 6..80 CDD:467031 25/69 (36%)

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