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Protein Alignment Nf-YC and pole4
DIOPT Version :9
Sequence 1: | NP_572354.1 |
Gene: | Nf-YC / 31622 |
FlyBaseID: | FBgn0029905 |
Length: | 601 |
Species: | Drosophila melanogaster |
Sequence 2: | XP_017213760.1 |
Gene: | pole4 / 553610 |
ZFINID: | ZDB-GENE-050522-309 |
Length: | 179 |
Species: | Danio rerio |
Alignment Length: | 127 |
Identity: | 38/127 - (29%) |
Similarity: | 65/127 - (51%) |
Gaps: | 11/127 - (8%) |
- Green bases have known domain annotations that are detailed below.
Fly 103 ATTVASGAKEKTTKATRTQVARKPPPTID----NFWPNIVSEVHSIGQVDAKHQVLPLARIKKIM 163
||..|:.|:.:..::...:..|...|..| ...|...::.|.:.: |||:|||.:|
Zfish 3 ATASAAPAESELDRSGAEEEPRGTEPEEDAGSGQTGPTAGAQQHRLAR-------LPLSRIKTLM 60
Fly 164 KLDENAKMIAGEAPLLFAKACEYFIQELTMHAWVHTEESRRRTLQRSDIAQAIANYDQFDFL 225
|.|.:..:.:.|:..:.|||.|.|::.:...|.|:.::.:|:||||.|:..||...|:|.||
Zfish 61 KADPDVTLASQESVFIIAKATELFVEMIAKDALVYAQQGKRKTLQRKDLDNAIEAIDEFAFL 122
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Nf-YC | NP_572354.1 |
HAP5 |
<130..>246 |
CDD:227533 |
32/100 (32%) |
pole4 | XP_017213760.1 |
None |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
0 | 0.000 |
Not matched by this tool. |
Domainoid |
0 | 0.000 |
Not matched by this tool. |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5208 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
1 |
1.010 |
- |
- |
|
D1622159at2759 |
OrthoFinder |
0 | 0.000 |
Not matched by this tool. |
OrthoInspector |
0 | 0.000 |
Not matched by this tool. |
orthoMCL |
0 | 0.000 |
Not matched by this tool. |
Panther |
0 | 0.000 |
Not matched by this tool. |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4325 |
SonicParanoid |
0 | 0.000 |
Not matched by this tool. |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
0 | 0.000 |
Not matched by this tool. |
ZFIN |
0 | 0.000 |
Not matched by this tool. |
|
4 | 3.850 |
|
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