DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Nf-YC and chrac1

DIOPT Version :10

Sequence 1:NP_572354.1 Gene:Nf-YC / 31622 FlyBaseID:FBgn0029905 Length:601 Species:Drosophila melanogaster
Sequence 2:NP_001015967.1 Gene:chrac1 / 548721 XenbaseID:XB-GENE-1015224 Length:147 Species:Xenopus tropicalis


Alignment Length:91 Identity:34/91 - (37%)
Similarity:50/91 - (54%) Gaps:0/91 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 LPLARIKKIMKLDENAKMIAGEAPLLFAKACEYFIQELTMHAWVHTEESRRRTLQRSDIAQAIAN 218
            |||:||:.|||...:...|..:|.::.|||.|.|:|.|..|::.|......:||..||:|.|...
 Frog    11 LPLSRIRLIMKSSPDVSNINQDALMVTAKATELFVQFLATHSYKHGTGKETKTLTYSDLANAAEE 75

  Fly   219 YDQFDFLIDIVPREEIKPSSAQKTKD 244
            .:.|.||.||:|::.:.....|..||
 Frog    76 SETFQFLSDILPKKILASDYLQMLKD 101

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Nf-YCNP_572354.1 HFD_NFYC-like 148..230 CDD:467033 30/75 (40%)
chrac1NP_001015967.1 HFD_CHRAC1-like 11..86 CDD:467049 29/74 (39%)

Return to query results.
Submit another query.