Protein Alignment Nf-YC and rpoa-49

DIOPT Version :10

• Sequence 1: NP_572354.1
• Gene: Nf-YC / 31622
• FlyBaseID: FBgn0029905
• Length: 601
• Species: Drosophila melanogaster
• Sequence 2: NP_001293501.1
• Gene: rpoa-49 / 24104475
• WormBaseID: WBGene00017749
• Length: 432
• Species: Caenorhabditis elegans
• Alignment Length: 346
• Identity: 66/346 - (19%)
• Similarity: 119/346 - (34%)
• Gaps: 114/346 - (32%)

  Fly     4 TNNGGTNKAPNSNATSMFDNTITVTPIKMELGQAYAKSQNSAAMQRRTPNAVVVTS--SSTVSSA 66
            |:|.|::|                 .|||:           .|.||||.|...:..  .:..:|.
 Worm   152 TSNFGSSK-----------------KIKMD-----------EAAQRRTINQETLDEMRKTAFASN 188

  Fly    67 QQQQQQQGQQQQQTVPMASLVSNACTLVNPSMSVTVATTVASGAKEKTTKATRTQVARKPPPTID 131
            ...:.:.|        .|.:.....|::|.:.|..:            ..|.:|:::|...| |.
 Worm   189 SNVKTEDG--------AADVKLENITMMNKAESSIL------------PPAVQTELSRDIYP-IS 232

  Fly   132 NFWPNIVSEVHSIGQVDAKHQVLPLARIKKIMKLDENAKMIAG--EAPLLF-------AKACEYF 187
            .|..:|        ::||...:     ..::|:..:..|:.||  |...|.       .:|..|.
 Worm   233 LFLEDI--------EIDAIESI-----ATELMEKKKKEKLEAGIPECVTLIMYNEKTKQRAAAYL 284

  Fly   188 IQELTMHAWVHTEESRRRTLQRSDIAQAIANYDQFDFLIDIVPREEIKPSSAQKTKDGSTSSSSG 252
            :  |:....:.|:..::|.|.|.|:::.        .:.||: |::::   ||...|  :::..|
 Worm   285 L--LSTMIEILTKMGKQRQLLRKDLSEL--------KMPDIL-RQKVQ---AQFFND--STNEKG 333

  Fly   253 MAGAASSAASTSNTATSNAAASVAGNATATGNFVASGSTVPATTAGGLKLDTTGATNAA------ 311
            ..|              ..|..:..|.|....|:|....:..|.|...|:..|....|.
 Worm   334 YTG--------------RGAERIRLNVTDYDRFIAHTLALALTLAPEHKVPITPFQQALSYQPSK 384

  Fly   312 -----EVLGFSTVNSDIFSAQ 327
                 :.||...:..|:.|||
 Worm   385 LEKMFQALGADLIRLDVASAQ 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nf-YC	NP_572354.1	HFD_NFYC-like	148..230	CDD:467033	18/90 (20%)
rpoa-49	NP_001293501.1	RNA_pol_I_A49	44..418	CDD:462024	66/346 (19%)