Protein Alignment Nf-YC and rpoa-49

DIOPT Version :9

• Sequence 1: NP_572354.1
• Gene: Nf-YC / 31622
• FlyBaseID: FBgn0029905
• Length: 601
• Species: Drosophila melanogaster
• Sequence 2: NP_001293501.1
• Gene: rpoa-49 / 24104475
• WormBaseID: WBGene00017749
• Length: 432
• Species: Caenorhabditis elegans
• Alignment Length: 346
• Identity: 66/346 - (19%)
• Similarity: 119/346 - (34%)
• Gaps: 114/346 - (32%)

  Fly     4 TNNGGTNKAPNSNATSMFDNTITVTPIKMELGQAYAKSQNSAAMQRRTPNAVVVTS--SSTVSSA 66
            |:|.|::|                 .|||:           .|.||||.|...:..  .:..:|.
 Worm   152 TSNFGSSK-----------------KIKMD-----------EAAQRRTINQETLDEMRKTAFASN 188

  Fly    67 QQQQQQQGQQQQQTVPMASLVSNACTLVNPSMSVTVATTVASGAKEKTTKATRTQVARKPPPTID 131
            ...:.:.|        .|.:.....|::|.:.|..:            ..|.:|:::|...| |.
 Worm   189 SNVKTEDG--------AADVKLENITMMNKAESSIL------------PPAVQTELSRDIYP-IS 232

  Fly   132 NFWPNIVSEVHSIGQVDAKHQVLPLARIKKIMKLDENAKMIAG--EAPLLF-------AKACEYF 187
            .|..:|        ::||...:     ..::|:..:..|:.||  |...|.       .:|..|.
 Worm   233 LFLEDI--------EIDAIESI-----ATELMEKKKKEKLEAGIPECVTLIMYNEKTKQRAAAYL 284

  Fly   188 IQELTMHAWVHTEESRRRTLQRSDIAQAIANYDQFDFLIDIVPREEIKPSSAQKTKDGSTSSSSG 252
            :  |:....:.|:..::|.|.|.|:::.        .:.||: |::::   ||...|  :::..|
 Worm   285 L--LSTMIEILTKMGKQRQLLRKDLSEL--------KMPDIL-RQKVQ---AQFFND--STNEKG 333

  Fly   253 MAGAASSAASTSNTATSNAAASVAGNATATGNFVASGSTVPATTAGGLKLDTTGATNAA------ 311
            ..|              ..|..:..|.|....|:|....:..|.|...|:..|....|.
 Worm   334 YTG--------------RGAERIRLNVTDYDRFIAHTLALALTLAPEHKVPITPFQQALSYQPSK 384

  Fly   312 -----EVLGFSTVNSDIFSAQ 327
                 :.||...:..|:.|||
 Worm   385 LEKMFQALGADLIRLDVASAQ 405

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Nf-YC	NP_572354.1	HAP5	<130..>246	CDD:227533	25/124 (20%)
rpoa-49	NP_001293501.1	RNA_pol_I_A49	44..426	CDD:284324	66/346 (19%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5208
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900