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Protein Alignment Nf-YC and nfyc-1
DIOPT Version :9
Sequence 1: | NP_572354.1 |
Gene: | Nf-YC / 31622 |
FlyBaseID: | FBgn0029905 |
Length: | 601 |
Species: | Drosophila melanogaster |
Sequence 2: | NP_493645.1 |
Gene: | nfyc-1 / 173385 |
WormBaseID: | WBGene00017742 |
Length: | 232 |
Species: | Caenorhabditis elegans |
Alignment Length: | 156 |
Identity: | 52/156 - (33%) |
Similarity: | 89/156 - (57%) |
Gaps: | 23/156 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 131 DNFWPNIVSEVHSIGQVD----AKHQVLPLARIKKIMKLDENAK--MIAGEAPLLFAKACEYFIQ 189
::||.....::..|.:.| :|:..:|:||:||||::|::.: |||.:||:..|:|.|:||:
Worm 83 EDFWREKKQKMTEISEEDMLNKSKNMSVPMARVKKIMRIDDDVRNFMIASDAPIFMAQAAEFFIE 147
Fly 190 ELTMHAWVHTEESRRRTLQRSDIAQAIANYDQFDFLIDIVPREEIKPSSAQKTKDGSTSSSSGMA 254
|:|...|.:..|:|||.||::|||.|:...||||||||.:|.:.: .|:|::|..
Worm 148 EMTAMGWQYVSEARRRILQKADIASAVQKSDQFDFLIDFLPPKTV-----------PTTSTNGPG 201
Fly 255 GAASSAASTSN------TATSNAAAS 274
..:..:....| ..|||::.:
Worm 202 HMSEDSFQDPNMHSDFHQRTSNSSVN 227
|
Known Domains:
Indicated by green bases in alignment.
Gene | Sequence | Domain | Region |
External ID | Identity |
Nf-YC | NP_572354.1 |
HAP5 |
<130..>246 |
CDD:227533 |
45/120 (38%) |
nfyc-1 | NP_493645.1 |
HAP5 |
65..>206 |
CDD:227533 |
48/133 (36%) |
Information from Original Tools:
Tool |
Simple Score |
Weighted Score |
Original Tool Information |
BLAST Result |
Score |
Score Type |
Cluster ID |
Compara |
1 |
0.930 |
- |
- |
|
C160167940 |
Domainoid |
1 |
1.000 |
71 |
1.000 |
Domainoid score |
I6207 |
eggNOG |
1 |
0.900 |
- |
- |
|
E1_COG5208 |
Hieranoid |
0 | 0.000 |
Not matched by this tool. |
Homologene |
0 | 0.000 |
Not matched by this tool. |
Inparanoid |
0 | 0.000 |
Not matched by this tool. |
Isobase |
0 | 0.000 |
Not matched by this tool. |
OMA |
0 | 0.000 |
Not matched by this tool. |
OrthoDB |
0 | 0.000 |
Not matched by this tool. |
OrthoFinder |
1 |
1.000 |
- |
- |
|
FOG0001272 |
OrthoInspector |
1 |
1.000 |
- |
- |
|
oto18062 |
orthoMCL |
1 |
0.900 |
- |
- |
|
OOG6_101766 |
Panther |
1 |
1.100 |
- |
- |
LDO |
PTHR10252 |
Phylome |
1 |
0.910 |
- |
- |
|
|
RoundUp |
1 |
1.030 |
- |
avgDist |
Average_Evolutionary_Distance |
R4325 |
SonicParanoid |
1 |
1.000 |
- |
- |
|
X881 |
SwiftOrtho |
0 | 0.000 |
Not matched by this tool. |
TreeFam |
1 |
0.960 |
- |
- |
|
|
|
11 | 10.730 |
|
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