DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tfeb and Mitf

DIOPT Version :10

Sequence 1:XP_063123157.1 Gene:Tfeb / 316214 RGDID:1309583 Length:485 Species:Rattus norvegicus
Sequence 2:NP_001245436.1 Gene:Mitf / 3885647 FlyBaseID:FBgn0263112 Length:837 Species:Drosophila melanogaster


Alignment Length:540 Identity:160/540 - (29%)
Similarity:225/540 - (41%) Gaps:164/540 - (30%)


- Green bases have known domain annotations that are detailed below.


  Rat     7 TAAMASRIGLRMQLMREQAQQEEQRERMQQQAV-------MHYM--------------------- 43
            ||...||..|::||.|||.||    ..:|||.:       ||.:                     
  Fly   173 TATPTSRTQLKLQLQREQQQQ----MMIQQQTLDTAMDPKMHLLFGSGQGLMESEFIDSGSTSAC 233

  Rat    44 --------QQQQQQQQQQLGGPPTPAINTPVHFQS-PPPVPGEVLKVQSYLENPTSYHLQQSQHQ 99
                    |..|..|...|....:.| ...|..|| ...||.:||:|.:.|||||.||:.|.|..
  Fly   234 GSGSSSLEQMSQLVQMDNLIDSSSGA-KLKVPLQSIGVDVPPQVLQVSTVLENPTRYHVIQKQKN 297

  Rat   100 KVREYLSETY---------------------------------------GNKF-------AAHVS 118
            :||:||||::                                       .|:|       |..:.
  Fly   298 QVRQYLSESFKPSMWGSHTSEIKLANNSASTGNLQNSSLQKGICDPLERTNRFGCDSAVSAKRIM 362

  Rat   119 PAQGSPKPPPAASPGVRAGHVLSTSAGNSAPNSPMAMLHISSNPEKEFDDVIDNIMRLDSVLGYI 183
            |:..:....|.....||...:.........|||     |.:..||.........:.:.:|.|...
  Fly   363 PSDDAMPISPFGGSFVRCDDINPIEPTVLRPNS-----HGAGEPENAHRTAQLGLSKANSSLSST 422

  Rat   184 NPEMQMPNTLPLSSSHLNVYSGDPQVTASLVGV-TSSSCPAD--------------------LTQ 227
            .....:.|::.:||:..::.|....::.|:..| ||.|.|.|                    |:.
  Fly   423 RSSSGIVNSIRISSTSSSLQSTSAPISPSVSSVATSVSEPDDIFDDILQNDSFNFDKNFNSELSI 487

  Rat   228 KRE---LTDAESRALAKERQKKDNHNLIERRRRFNINDRIKELGMLIPKANDL------DVRWNK 283
            |:|   |||||..||||:||||||||:|||||||||||||||||.|:||.:|.      |:|.||
  Fly   488 KQEPQNLTDAEMNALAKDRQKKDNHNMIERRRRFNINDRIKELGTLLPKGSDAFYEVVRDIRPNK 552

  Rat   284 GTILKASVDYIRRMQKDLQKSRELENHSRRLEMTNKQLWLRIQELEMQARVHGL----------- 337
            |||||:|||||:.::.::.:.|:.|...|::|:.|::|..||:||||||:.||:           
  Fly   553 GTILKSSVDYIKCLKHEVTRLRQNELRQRQVELQNRKLMSRIKELEMQAKSHGILLSENHLTSLS 617

  Rat   338 -------------PTTSPSGVNMAELAQQVVKQELPSEDNPGETLMLGS----------EVPDPE 379
                         ||.|.|   ...|..|.|::::...|.....:.:..          .|...:
  Fly   618 APTQPYLKSFSLSPTASRS---RRSLFDQPVEKKIQVIDGADGNMGMNQVDEFMEDCKYAVQGGD 679

  Rat   380 PMPALPPQAPLPSAAQPQSP 399
            ||  |...:.:.||  ||||
  Fly   680 PM--LSSHSHMQSA--PQSP 695

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
TfebXP_063123157.1 None
MitfNP_001245436.1 MITF_TFEB_C_3_N <272..>311 CDD:464952 20/38 (53%)
bHLHzip_MITF_like 504..577 CDD:381403 45/72 (63%)

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