DRSC/TRiP Functional Genomics Resources

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Protein Alignment iav and trpv4

DIOPT Version :9

Sequence 1:NP_572353.1 Gene:iav / 31621 FlyBaseID:FBgn0086693 Length:1123 Species:Drosophila melanogaster
Sequence 2:XP_005165208.1 Gene:trpv4 / 557850 ZFINID:ZDB-GENE-030912-7 Length:859 Species:Danio rerio


Alignment Length:664 Identity:169/664 - (25%)
Similarity:280/664 - (42%) Gaps:130/664 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly   155 LRVFPNLAL-DVMEGEEYLGASALHLSIAYSNNELVADLIEAGADIHQRAIGSFFLPRDQQRANP 218
            ||.|.|... ||.    |.|..|||::|.....:.|..|:|.|||:|.:|.|.||.|||:     
Zfish   233 LREFINTPFRDVY----YRGQMALHIAIERRCKQYVELLVEKGADVHAQARGRFFQPRDE----- 288

  Fly   219 AKSTDYEGLAYMGEYPLAWAACCANESVYNLLVDCG---SDPDAQDSFGNMILH----------- 269
                  .|..|.||.||:.|||.....:.:.|.:.|   :|...|||.||.:||           
Zfish   289 ------GGYFYFGELPLSLAACTNQPDMVHYLTENGHKKADLRRQDSRGNTVLHALVHIADNTRD 347

  Fly   270 -----------MVVVCDKLDMFGYALRHPKTPAKNGIVNQTGLTPLTLACKLGRAEVF-----RE 318
                       :::.|.||        :|....:| |:|..|::||.:|.|||:..||     ||
Zfish   348 NTRFVTKMFDLLLIKCAKL--------YPDCNLEN-ILNNDGMSPLMMAAKLGKIGVFQHIIRRE 403

  Fly   319 MLELSAREF------WRYSNITCSGYPLNALDTLLPDGRTNWNSALFIILNGTKPEHL-DMLDGG 376
            :.:..||..      |.|..:..:.|.|::|||...:     .|.|.|::..:|.|:. :||...
Zfish   404 IKDEEARHLSRKFKDWAYGPVYSNLYDLSSLDTCGEE-----VSVLEILVYNSKIENRHEMLAVE 463

  Fly   377 IIQRLLEEKWKTFAQNQFLKRLLILSTHLLCLSVSVYLRPAHDGEAEDEDSEGSDASAAALLDIQ 441
            .|..||..||:.||...|...:......::..::..|.||          |.|....|   .|..
Zfish   464 PINELLRAKWQKFAAVTFYISVFSYLVTMIIFTLVAYYRP----------SVGKPPYA---YDTT 515

  Fly   442 SDEGDSGGGDYNAQTVARYCAEFATLVGVLSYVIFQQGDEIKNQGLSAFLKQLSHAPA------- 499
            .|:             .|...|..|:...|.:.:    ..||:    .|||:.....:       
Zfish   516 EDK-------------VRLAGEIITVGSGLFFFV----TNIKD----LFLKKCPGVNSIFVDGSF 559

  Fly   500 KAIFLFSNLLILACIPFRLIGDTDTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMIYSMITGD 564
            :.::...::|:|......|.| .:...::::||:...|...::|...::|||.:..||..::..|
Zfish   560 QLLYFIYSVLVLVSAALYLSG-IEAYVSVMVFALTLGWMNTLYFTRGLKLTGTYSIMIQKILIKD 623

  Fly   565 MFTFGIIYCIVLCGFSQAFYFLY-------------KGHPQVQSTMFNTYTSTWMALFQTTLGDY 616
            :|.|.::|.:.:.|::.|...|.             ..:|:.:.|  ||::...:.||:.|:|..
Zfish   624 LFRFLLVYVLFMIGYASALVSLLTICPDKDTCKENCPTYPECRDT--NTFSEFLLDLFKLTIGIG 686

  Fly   617 NYPD-LNQTTYPNLSKTVFVIFMIFVPILLLNMLIAMMGNTYVTVIEQSEKEWMKQWAKIVVTLE 680
            :..: |....||.:...:.|.::|...:||||||||:||.|...|.::|:|.|..|||..::.:|
Zfish   687 DLDNMLKGAQYPAVFLILLVTYIILTFVLLLNMLIALMGETVGQVSKESKKIWKLQWATTILDIE 751

  Fly   681 RAVPQADAKGYLEAYSIPLGPSDDSGFEVRGVMVIKSKSKTRAKQRKGAVSNWKRVGRVTLTALK 745
            |:.|....:.:.....:.:|...|...:.|....:.....:...|..|.::  :..|:..|:   
Zfish   752 RSFPVCLRRSFRVGEMVTVGKGLDGKPDKRWCFRVDEVKWSHWNQNLGIIN--EDPGQKDLS--- 811

  Fly   746 KRGMTGEEMRRLMW 759
            :....|..:||..|
Zfish   812 EHTQGGRGLRRDRW 825

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iavNP_572353.1 ANKYR <127..>202 CDD:223738 19/47 (40%)
ANK repeat 132..164 CDD:293786 4/9 (44%)
ANK 173..315 CDD:238125 52/166 (31%)
ANK repeat 173..203 CDD:293786 12/29 (41%)
Ank_2 177..261 CDD:289560 29/86 (34%)
ANK repeat 230..261 CDD:293786 10/33 (30%)
Ank_2 235..324 CDD:289560 32/118 (27%)
ANK 258..414 CDD:238125 49/189 (26%)
ANK repeat 299..329 CDD:293786 13/40 (33%)
Ion_trans 501..665 CDD:278921 45/177 (25%)
trpv4XP_005165208.1 trp 159..857 CDD:273311 169/664 (25%)
ANK repeat 247..278 CDD:293786 12/30 (40%)
ANK 248..400 CDD:238125 54/171 (32%)
ANK repeat 294..328 CDD:293786 10/33 (30%)
ANK repeat 330..364 CDD:293786 4/33 (12%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170578395
Domainoid 1 1.000 73 1.000 Domainoid score I9182
eggNOG 1 0.900 - - E1_KOG3676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 179 1.000 Inparanoid score I4007
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6594
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 1 1.000 - - X396
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
ZFIN 00.000 Not matched by this tool.
109.760

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