DRSC/TRiP Functional Genomics Resources

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Protein Alignment iav and Trpv3

DIOPT Version :9

Sequence 1:NP_572353.1 Gene:iav / 31621 FlyBaseID:FBgn0086693 Length:1123 Species:Drosophila melanogaster
Sequence 2:NP_659567.2 Gene:Trpv3 / 246788 MGIID:2181407 Length:791 Species:Mus musculus


Alignment Length:605 Identity:167/605 - (27%)
Similarity:268/605 - (44%) Gaps:107/605 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly   135 LLHVLIICDSKVHTKLARVLLRVFPN--------LAL----DVME--------GEEYLGASALHL 179
            |:|.|...|:. .|.|.:.||.:.||        ||.    |:::        .|.|.|.:||::
Mouse   158 LMHKLTASDTG-KTCLMKALLNINPNTKEIVRILLAFAEENDILDRFINAEYTEEAYEGQTALNI 221

  Fly   180 SIAYSNNELVADLIEAGADIHQRAIGSFFLPRDQQRANPAKSTDYEGLAYMGEYPLAWAACCANE 244
            :|.....::.|.||.||||::..|.|.||.|:.|          :||. |.||.|||.|||....
Mouse   222 AIERRQGDITAVLIAAGADVNAHAKGVFFNPKYQ----------HEGF-YFGETPLALAACTNQP 275

  Fly   245 SVYNLLVDC-GSDPDAQDSFGNMILH-MVVVCDKLD--------MFGYALRHPKTPAKNGIVNQT 299
            .:..||::. .:|..:|||.||.||| :|.|.:...        |:...|..........:.|..
Mouse   276 EIVQLLMENEQTDITSQDSRGNNILHALVTVAEDFKTQNDFVKRMYDMILLRSGNWELETMRNND 340

  Fly   300 GLTPLTLACKLGRAEVFREMLELS---------AREF--WRYSNITCSGYPLNALDTLLPDGRTN 353
            |||||.||.|:|:||:.:.:|...         :|:|  |.|..::.|.|.|..:||      |.
Mouse   341 GLTPLQLAAKMGKAEILKYILSREIKEKPLRSLSRKFTDWAYGPVSSSLYDLTNVDT------TT 399

  Fly   354 WNSALFIILNGTKPEHL-DMLDGGIIQRLLEEKWKTFAQNQFLKRLLILSTHLLCLSVSVYLRPA 417
            .||.|.||:..|..::. :||....:..||..|||.||:..|.........:.:.|::..|.|| 
Mouse   400 DNSVLEIIVYNTNIDNRHEMLTLEPLHTLLHTKWKKFAKYMFFLSFCFYFFYNITLTLVSYYRP- 463

  Fly   418 HDGEAEDEDSEGSDASAAALLDIQSDEGDSGGGDYNAQTVARYCAEFATLVGVLSYVIFQQGDEI 482
                .||||.....|....:..:|                         |:|.:..:|:.....:
Mouse   464 ----REDEDLPHPLALTHKMSWLQ-------------------------LLGRMFVLIWATCISV 499

  Fly   483 KNQGLSAFLKQ-------LSHAPAKAIFLFSNLLILACIPFRLIGDTDTEEAILIFAVPGSWFLL 540
            | :|::.||.:       ||.|....:|....:|::..: |..:.......|.|:.|:...|..:
Mouse   500 K-EGIAIFLLRPSDLQSILSDAWFHFVFFVQAVLVILSV-FLYLFAYKEYLACLVLAMALGWANM 562

  Fly   541 MFFAGAIRLTGPFVTMIYSMITGDMFTFGIIYCIVLCGFSQAFYFLYK--GHPQVQSTMFNTYTS 603
            :::....:..|.:..||..:|..|:..|..:|.:.|.||..|...|.:  ...:...:.:.:::.
Mouse   563 LYYTRGFQSMGMYSVMIQKVILHDVLKFLFVYILFLLGFGVALASLIEKCSKDKKDCSSYGSFSD 627

  Fly   604 TWMALFQTTLGDYNYPDLN---QTTYPNLSKTVFVIFMIFVPILLLNMLIAMMGNTYVTVIEQSE 665
            ..:.||:.|:|   ..|||   .:|||.|...:.:.::|...:||||||||:||.|...|.::||
Mouse   628 AVLELFKLTIG---LGDLNIQQNSTYPILFLFLLITYVILTFVLLLNMLIALMGETVENVSKESE 689

  Fly   666 KEWMKQWAKIVVTLERAVPQ 685
            :.|..|.|:.::..|:.:|:
Mouse   690 RIWRLQRARTILEFEKMLPE 709

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iavNP_572353.1 ANKYR <127..>202 CDD:223738 26/86 (30%)
ANK repeat 132..164 CDD:293786 12/40 (30%)
ANK 173..315 CDD:238125 54/151 (36%)
ANK repeat 173..203 CDD:293786 11/29 (38%)
Ank_2 177..261 CDD:289560 29/84 (35%)
ANK repeat 230..261 CDD:293786 11/31 (35%)
Ank_2 235..324 CDD:289560 33/107 (31%)
ANK 258..414 CDD:238125 52/176 (30%)
ANK repeat 299..329 CDD:293786 14/40 (35%)
Ion_trans 501..665 CDD:278921 43/168 (26%)
Trpv3NP_659567.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..37
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 51..113
trp 123..753 CDD:273311 167/605 (28%)
ANK repeat 168..201 CDD:293786 9/33 (27%)
ANK repeat 214..245 CDD:293786 11/30 (37%)
ANK 1 214..243 11/28 (39%)
ANK repeat 261..293 CDD:293786 11/31 (35%)
ANK 2 261..291 11/29 (38%)
ANK 3 340..369 12/28 (43%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835186
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8679
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
65.710

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