DRSC/TRiP Functional Genomics Resources

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Protein Alignment iav and Trpv2

DIOPT Version :9

Sequence 1:NP_572353.1 Gene:iav / 31621 FlyBaseID:FBgn0086693 Length:1123 Species:Drosophila melanogaster
Sequence 2:NP_001369418.1 Gene:Trpv2 / 22368 MGIID:1341836 Length:756 Species:Mus musculus


Alignment Length:605 Identity:148/605 - (24%)
Similarity:238/605 - (39%) Gaps:149/605 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   157 VFPNLALDVMEG------------EEYLGASALHLSIAYSNNELVADLIEAGADIHQRAIGSFFL 209
            :.|.|.:|...|            |.|.|.||||::|...:...|..|:|.||::|.||.|.|| 
Mouse   131 ILPLLQIDRDSGNPQPLVNAQCTDEFYRGHSALHIAIEKRSLWCVKLLVENGANVHIRACGRFF- 194

  Fly   210 PRDQQRANPAKSTDYEGLA-YMGEYPLAWAACCANESVYNLLVDCGSDP---DAQDSFGNMILH- 269
                        ..::|.. |.||.||:.|||.....|...|::....|   :|.||.||.:|| 
Mouse   195 ------------QKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHA 247

  Fly   270 MVVVCDK--------LDMFGYAL----RHPKTPAKNGIVNQTGLTPLTLACKLGRAEVFREMLEL 322
            :|::.|.        :.|:...|    |...|.....|.|..|||||.||.|.|:.|:||.:|: 
Mouse   248 LVMIADNSPENSALVIHMYDSLLQMGARLCPTVQLEDICNHQGLTPLKLAAKEGKIEIFRHILQ- 311

  Fly   323 SAREF-------------WRYSNITCSGYPLNALDTLLPDGRTNW--NSALFIILNGTKPEH--- 369
              |||             |.|..:..|.|.|:::|        :|  ||.|.||....|..|   
Mouse   312 --REFSGLYQPLSRKFTEWCYGPVRVSLYDLSSVD--------SWEKNSVLEIIAFHCKSPHRHR 366

  Fly   370 LDMLDGGIIQRLLEEKWKTFAQNQFLKRLLILSTHLLCLSVSVYLRPAHDGEAEDEDSEGSDASA 434
            :.:|:.  :.:||:|||.......|......| .:::..::..|.:|:.:..|            
Mouse   367 MVVLEP--LNKLLQEKWDRLIPRFFFNFACYL-VYMIIFTIVAYHQPSLEQPA------------ 416

  Fly   435 AALLDIQSDEGDSGGGDYNAQTVARYCAEFATLVGVLSYVIFQQGDEIKNQGLSAFLKQLSH--- 496
                 |.|.:                 |.|...:.:|.:::...|      |:...|.||.:   
Mouse   417 -----IPSSK-----------------ATFGDSMLLLGHILILLG------GIYLLLGQLWYFWR 453

  Fly   497 -----------APAKAIFLFSNLLILACIPFRLIGDTDTEEAILIFAVPGSWFLLMFFAGAIRLT 550
                       :..:.:||...||.:.....|.: :|:....:|:.::...|..|:::....:.|
Mouse   454 RRLFIWISFMDSYFEILFLVQALLTVLSQVLRFV-ETEWYLPLLVSSLVLGWLNLLYYTRGFQHT 517

  Fly   551 GPFVTMIYSMITGDMFTFGIIYCIVLCGFSQAFYFLYK--GHPQVQSTMFNTYT----------- 602
            |.:..||..:|..|:..|.::|.:.|.||:.|...|.:  ..|:.......|.|           
Mouse   518 GIYSVMIQKVILRDLLRFLLVYLVFLFGFAVALVSLSREARSPKAPEDSNTTVTEKPTLGQEEEP 582

  Fly   603 -------STWMALFQTTLGDYNYPDLNQTTYPNLSKTVFVIFMIFVPILLLNMLIAMMGNTYVTV 660
                   ...:.||:.|:|........|..:..:...:.:.:::...:||||||||:|..|..:|
Mouse   583 VPYGGILDASLELFKFTIGMGELAFQEQLRFRGVVLLLLLAYVLLTYVLLLNMLIALMSETVNSV 647

  Fly   661 IEQSEKEWMKQWAKIVVTLE 680
            ...|...|..|.|..|:.:|
Mouse   648 ATDSWSIWKLQKAISVLEME 667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iavNP_572353.1 ANKYR <127..>202 CDD:223738 18/56 (32%)
ANK repeat 132..164 CDD:293786 2/6 (33%)
ANK 173..315 CDD:238125 53/158 (34%)
ANK repeat 173..203 CDD:293786 12/29 (41%)
Ank_2 177..261 CDD:289560 27/87 (31%)
ANK repeat 230..261 CDD:293786 11/33 (33%)
Ank_2 235..324 CDD:289560 35/104 (34%)
ANK 258..414 CDD:238125 53/186 (28%)
ANK repeat 299..329 CDD:293786 16/42 (38%)
Ion_trans 501..665 CDD:278921 41/183 (22%)
Trpv2NP_001369418.1 Required for interaction with SLC50A1. /evidence=ECO:0000250 1..385 86/279 (31%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..45
TRPV2 66..705 CDD:411981 148/605 (24%)
ANK repeat 112..154 CDD:293786 4/22 (18%)
ANK repeat 158..189 CDD:293786 12/30 (40%)
ANK repeat 204..238 CDD:293786 11/33 (33%)
ANK repeat 240..274 CDD:293786 8/33 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 559..583 3/23 (13%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 719..756
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167835188
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3676
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
54.710

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