DRSC/TRiP Functional Genomics Resources

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Protein Alignment iav and trpv4l.1

DIOPT Version :9

Sequence 1:NP_572353.1 Gene:iav / 31621 FlyBaseID:FBgn0086693 Length:1123 Species:Drosophila melanogaster
Sequence 2:XP_017950397.2 Gene:trpv4l.1 / 100494662 XenbaseID:XB-GENE-22066240 Length:1014 Species:Xenopus tropicalis


Alignment Length:736 Identity:170/736 - (23%)
Similarity:299/736 - (40%) Gaps:177/736 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    71 GVFMYNDGKGQVINRAEFLRWKYRDH-TEVT--IPIEASLSIHDPLGKWEDHKACWQMQYRGALG 132
            |:.::.....:::..:.:.....||: ||||  .|.......:..:.|.::|  .:.:..||:..
 Frog   268 GIEIFQTKSCEMVMDSRYHNVTERDYGTEVTPYDPRRGPYPDYPDIKKLKEH--LFDIVSRGSAA 330

  Fly   133 E--------SLLHVL-------IICDSKVHTKLARVLLRV-------------FPNLALDVMEG- 168
            |        .|||..       .:.||...|.|::.|:.:             ...:.::|.:. 
 Frog   331 ELEELRLLPFLLHEKKQLTDEEFLEDSTGKTCLSKALMHLNNGKNDTIPILIYIATITINVPQFI 395

  Fly   169 -----EEYLGASALHLSIAYSNNELVADLIEAGADIHQRAIGSFFLPRDQQRANPAKSTDYEGLA 228
                 :.|.|.:|||::|.....:.|..|::.|||:|.:|.|.||.|:|:           .|..
 Frog   396 NSPFLKYYDGQTALHIAIERRCKDYVELLVQNGADVHAQAKGRFFQPKDE-----------GGYF 449

  Fly   229 YMGEYPLAWAACC--------ANESVYNLLVDCGSDPDAQDSFGNMIL----------------- 268
            |.||.||:.|||.        ..|:|||     .:|...:||.||.:|                 
 Frog   450 YFGELPLSLAACTNQPDIVDYLTENVYN-----KADLCRRDSRGNTVLHALVAIADNTPENTKFV 509

  Fly   269 -----HMVVVCDKLDMFGYALRHPKTPAKNGIVNQTGLTPLTLACKLGRAEVFREMLELS----- 323
                 |:|:.|.||:         |..:...:.|...::||.:|.:||:.::|:.:::|.     
 Frog   510 TEMYDHLVIKCAKLN---------KESSLETVTNNDKMSPLMMAAQLGKIDIFQHIIQLEIKDEE 565

  Fly   324 ----AREF--WRYSNITCSGYPLNALDTLLPDGRTNWNSAL-FIILNGTKPEHLDMLDGGIIQRL 381
                :|:|  |.|..:..|.|.|..||| ..||    :|.| .::...|.....:||....|..|
 Frog   566 ARHLSRKFRDWTYGPVYSSLYDLTTLDT-YEDG----DSVLEILVYKSTAKNRHEMLAVEPINEL 625

  Fly   382 LEEKWKTFAQNQFLKRLLILSTHLLCLSVSVYLRPAHDGEAEDEDSEGSDASAAALLDIQSDEGD 446
            |:||||.|....|..........::..::..|.||.                             
 Frog   626 LKEKWKKFGAVLFYLSFFAYLFLMIIFTLVAYYRPM----------------------------- 661

  Fly   447 SGGGDYNAQTVA---RYCAEFATLVGVLSYVIFQQGDEI--KNQGL-SAFLK---QLSHAPAKAI 502
            .|...|..:|..   |...|...|:..:.:.|....|.|  |..|: |.|.:   ||.:      
 Frog   662 EGTPPYPYRTTTDHLRLVGEIVILLVGIVFFIANIKDLIMKKYPGVYSLFTEGCFQLLN------ 720

  Fly   503 FLFSNLLILACIPFRLIGDTDTEEAILIFAVPGSWFLLMFFAGAIRLTGPFVTMIYSMITGDMFT 567
            |::|.|::|..|.:  :...:...|:::.|:...|...::|...::|||.:..|:..::..|:|.
 Frog   721 FIYSVLVLLTAILY--LAGIEAYLAVMVIALVLGWINALYFTRGLKLTGMYSVMLQKVLFKDLFR 783

  Fly   568 FGIIYCIVLCGFSQAFYFLYK------------------GHPQVQSTMFNTYTSTWMALFQTTLG 614
            |.::|.:.:.|::.|...|..                  .:|..|.:  .|::...:.||..|:|
 Frog   784 FLLVYLLFMVGYASALVSLLNPCTNEMICNDGQENCTVPENPSCQHS--TTFSRLLLNLFTLTIG 846

  Fly   615 DYNYPDLNQTTYPNLSKTVFVIFMIFVPILLLNMLIAMMGNTYVTVIEQSEKEWMKQWAKIVVTL 679
            ..:...::...||.:...:.|.::|...:||||||||:||.|...|.::|::.|..|||..::.:
 Frog   847 MGDLEVISHAKYPAVFIILLVTYLIITFVLLLNMLIALMGETVGEVSKESKQIWQLQWATTILDI 911

  Fly   680 ERAVPQADAKGYLEAYSIPLG 700
            ||.:|....|.:....::.:|
 Frog   912 ERYLPAFMRKAFRSGEAVIIG 932

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
iavNP_572353.1 ANKYR <127..>202 CDD:223738 24/108 (22%)
ANK repeat 132..164 CDD:293786 9/59 (15%)
ANK 173..315 CDD:238125 48/171 (28%)
ANK repeat 173..203 CDD:293786 11/29 (38%)
Ank_2 177..261 CDD:289560 29/91 (32%)
ANK repeat 230..261 CDD:293786 12/38 (32%)
Ank_2 235..324 CDD:289560 28/127 (22%)
ANK 258..414 CDD:238125 45/189 (24%)
ANK repeat 299..329 CDD:293786 9/40 (23%)
Ion_trans 501..665 CDD:278921 43/181 (24%)
trpv4l.1XP_017950397.2 TRPV 281..968 CDD:424068 169/723 (23%)
ANK repeat 359..402 CDD:293786 4/42 (10%)
ANK repeat 404..435 CDD:293786 11/30 (37%)
ANK repeat 451..485 CDD:293786 12/38 (32%)
ANK repeat 487..526 CDD:293786 8/47 (17%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D386733at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9325
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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